Gene
RNA
| Item | Value |
|---|---|
| gene id | G133884 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 33848338 ~ 33848552 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU154169 | True | 215 | lncRNA | 0.40 | 1 | 33848338 | 33848552 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487876 | NA | coding | upstream | 89546 | 33749647 ~ 33758792 (+) |
| tap1 | tap1 | coding | upstream | 101897 | 33733444 ~ 33746441 (+) |
| LOC110487856 | LOC106581981 | coding | upstream | 122100 | 33719833 ~ 33726238 (+) |
| LOC110487797 | LOC106605278 | coding | upstream | 153397 | 33668143 ~ 33694941 (+) |
| LOC118939517 | NA | coding | upstream | 307643 | 33531590 ~ 33540695 (+) |
| LOC110487915 | LOC106582023 | coding | downstream | 25353 | 33873905 ~ 33880108 (+) |
| LOC110487926 | LOC106605271 | coding | downstream | 39287 | 33887839 ~ 33945400 (+) |
| LOC118939520 | NA | coding | downstream | 316134 | 34164350 ~ 34169250 (+) |
| LOC110488005 | rab5a | coding | downstream | 328491 | 34177043 ~ 34185964 (+) |
| ube2e2 | LOC106582102 | coding | downstream | 437898 | 34279641 ~ 34317474 (+) |
| G133878 | NA | non-coding | upstream | 7231 | 33840883 ~ 33841107 (+) |
| G133876 | NA | non-coding | upstream | 8177 | 33839913 ~ 33840161 (+) |
| G133857 | NA | non-coding | upstream | 31864 | 33816169 ~ 33816474 (+) |
| G133856 | NA | non-coding | upstream | 33493 | 33814628 ~ 33814845 (+) |
| G133855 | NA | non-coding | upstream | 35416 | 33812639 ~ 33812922 (+) |
| G133886 | NA | non-coding | downstream | 1438 | 33849990 ~ 33850809 (+) |
| G133895 | NA | non-coding | downstream | 18939 | 33867491 ~ 33867993 (+) |
| G133896 | NA | non-coding | downstream | 19893 | 33868445 ~ 33871942 (+) |
| G134764 | NA | non-coding | downstream | 135670 | 33984222 ~ 33984490 (+) |
| G134832 | NA | non-coding | downstream | 179899 | 34028451 ~ 34028684 (+) |
| G133760 | LOC106605274 | other | upstream | 33855 | 33814033 ~ 33814483 (+) |
| G133663 | LOC106605282 | other | upstream | 351053 | 33496454 ~ 33497285 (+) |
| G133473 | LOC106605294 | other | upstream | 678960 | 33167438 ~ 33169378 (+) |
| G132342 | LOC100136303 | other | upstream | 1960766 | 31834170 ~ 31887572 (+) |
| eaf1 | LOC106581241 | other | upstream | 2482016 | 31360408 ~ 31366322 (+) |
| G134735 | LOC100136012 | other | downstream | 113865 | 33962417 ~ 33962658 (+) |
| si:dkey-30e9.6 | LOC106605205 | other | downstream | 839403 | 34687955 ~ 34692286 (+) |
| G135916 | NA | other | downstream | 1123088 | 34971640 ~ 34971931 (+) |
| G135920 | LOC106605214 | other | downstream | 1123897 | 34972449 ~ 34972801 (+) |
| LOC110488281 | apom | other | downstream | 1136420 | 34984948 ~ 35000555 (+) |
