Gene
RNA
| Item | Value |
|---|---|
| gene id | G134764 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 33984222 ~ 33984490 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU155191 | True | 269 | lncRNA | 0.43 | 1 | 33984222 | 33984490 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487926 | LOC106605271 | coding | upstream | 38822 | 33887839 ~ 33945400 (+) |
| LOC110487915 | LOC106582023 | coding | upstream | 104114 | 33873905 ~ 33880108 (+) |
| LOC110487876 | NA | coding | upstream | 225430 | 33749647 ~ 33758792 (+) |
| tap1 | tap1 | coding | upstream | 237781 | 33733444 ~ 33746441 (+) |
| LOC110487856 | LOC106581981 | coding | upstream | 257984 | 33719833 ~ 33726238 (+) |
| LOC118939520 | NA | coding | downstream | 180196 | 34164350 ~ 34169250 (+) |
| LOC110488005 | rab5a | coding | downstream | 192553 | 34177043 ~ 34185964 (+) |
| ube2e2 | LOC106582102 | coding | downstream | 301960 | 34279641 ~ 34317474 (+) |
| LOC110488035 | LOC106582094 | coding | downstream | 333118 | 34317608 ~ 34324592 (+) |
| nr1d2a | LOC106582110 | coding | downstream | 343460 | 34327950 ~ 34335871 (+) |
| G133896 | NA | non-coding | upstream | 112280 | 33868445 ~ 33871942 (+) |
| G133895 | NA | non-coding | upstream | 116229 | 33867491 ~ 33867993 (+) |
| G133886 | NA | non-coding | upstream | 133413 | 33849990 ~ 33850809 (+) |
| G133884 | NA | non-coding | upstream | 135670 | 33848338 ~ 33848552 (+) |
| G133878 | NA | non-coding | upstream | 143115 | 33840883 ~ 33841107 (+) |
| G134832 | NA | non-coding | downstream | 43961 | 34028451 ~ 34028684 (+) |
| G134835 | NA | non-coding | downstream | 45703 | 34030193 ~ 34030403 (+) |
| G134871 | NA | non-coding | downstream | 66437 | 34050927 ~ 34051219 (+) |
| G134898 | NA | non-coding | downstream | 88554 | 34073044 ~ 34073262 (+) |
| G134925 | NA | non-coding | downstream | 124157 | 34108647 ~ 34113623 (+) |
| G134735 | LOC100136012 | other | upstream | 21564 | 33962417 ~ 33962658 (+) |
| G133760 | LOC106605274 | other | upstream | 169739 | 33814033 ~ 33814483 (+) |
| G133663 | LOC106605282 | other | upstream | 486937 | 33496454 ~ 33497285 (+) |
| G133473 | LOC106605294 | other | upstream | 814844 | 33167438 ~ 33169378 (+) |
| G132342 | LOC100136303 | other | upstream | 2096650 | 31834170 ~ 31887572 (+) |
| si:dkey-30e9.6 | LOC106605205 | other | downstream | 703465 | 34687955 ~ 34692286 (+) |
| G135916 | NA | other | downstream | 987150 | 34971640 ~ 34971931 (+) |
| G135920 | LOC106605214 | other | downstream | 987959 | 34972449 ~ 34972801 (+) |
| LOC110488281 | apom | other | downstream | 1000482 | 34984948 ~ 35000555 (+) |
| lypc | LOC106584559 | other | downstream | 1167270 | 35151760 ~ 35153650 (+) |
