Gene
RNA
| Item | Value |
|---|---|
| gene id | G134859 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 34043750 ~ 34044206 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tc3 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU155286 | True | 457 | lncRNA | 0.44 | 1 | 34043750 | 34044206 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487899 | LOC106605274 | coding | downstream | 192985 | 33779193 ~ 33850765 (-) |
| LOC110487833 | LOC106581966 | coding | downstream | 311306 | 33725770 ~ 33732444 (-) |
| LOC110487821 | LOC106605277 | coding | downstream | 328103 | 33712265 ~ 33715647 (-) |
| LOC110487810 | LOC106605280 | coding | downstream | 338953 | 33695017 ~ 33704797 (-) |
| LOC110487773 | LOC106605251 | coding | downstream | 381129 | 33648123 ~ 33662621 (-) |
| LOC110487942 | LOC106582030 | coding | upstream | 30349 | 34074555 ~ 34134234 (-) |
| LOC110534769 | efhb | coding | upstream | 126539 | 34170745 ~ 34171718 (-) |
| LOC110534780 | pp2d1 | coding | upstream | 141848 | 34186054 ~ 34188011 (-) |
| LOC110488012 | LOC106605268 | coding | upstream | 149453 | 34193659 ~ 34234849 (-) |
| nek10 | nek10 | coding | upstream | 326610 | 34370816 ~ 34384026 (-) |
| G134811 | NA | non-coding | downstream | 25913 | 34017530 ~ 34017837 (-) |
| G134770 | NA | non-coding | downstream | 54304 | 33989240 ~ 33989446 (-) |
| G134739 | LOC106600457 | non-coding | downstream | 78010 | 33965507 ~ 33965740 (-) |
| G134680 | NA | non-coding | downstream | 163327 | 33879305 ~ 33880423 (-) |
| G134669 | NA | non-coding | downstream | 176837 | 33866308 ~ 33866913 (-) |
| G134863 | NA | non-coding | upstream | 2053 | 34046259 ~ 34046499 (-) |
| G135143 | NA | non-coding | upstream | 121150 | 34165356 ~ 34165673 (-) |
| G135170 | NA | non-coding | upstream | 172611 | 34216817 ~ 34217054 (-) |
| G135210 | NA | non-coding | upstream | 272525 | 34316731 ~ 34317466 (-) |
| G134668 | NA | other | downstream | 177813 | 33865488 ~ 33865937 (-) |
| LOC110487618 | LOC100380645 | other | downstream | 818648 | 33208500 ~ 33225125 (-) |
| G134102 | NA | other | downstream | 1255629 | 32748208 ~ 32788121 (-) |
| LOC110514821 | NA | other | downstream | 1292172 | 32738829 ~ 32756992 (-) |
| LOC110486999 | prdm1 | other | downstream | 2394955 | 31631886 ~ 31648795 (-) |
| G135575 | NA | other | upstream | 560009 | 34604215 ~ 34604478 (-) |
| G136399 | psmc4 | other | upstream | 1262161 | 35306367 ~ 35307729 (-) |
| drd2l | LOC106582624 | other | upstream | 1630092 | 35674291 ~ 35700846 (-) |
| G137479 | NA | other | upstream | 2325798 | 36370004 ~ 36370328 (-) |
| G137839 | LOC106605146 | other | upstream | 2589987 | 36634193 ~ 36639005 (-) |
