Gene
RNA
| Item | Value |
|---|---|
| gene id | G134871 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 34050927 ~ 34051219 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU155298 | True | 217 | lncRNA | 0.43 | 2 | 34050927 | 34051219 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487926 | LOC106605271 | coding | upstream | 105527 | 33887839 ~ 33945400 (+) |
| LOC110487915 | LOC106582023 | coding | upstream | 170819 | 33873905 ~ 33880108 (+) |
| LOC110487876 | NA | coding | upstream | 292135 | 33749647 ~ 33758792 (+) |
| tap1 | tap1 | coding | upstream | 304486 | 33733444 ~ 33746441 (+) |
| LOC110487856 | LOC106581981 | coding | upstream | 324689 | 33719833 ~ 33726238 (+) |
| LOC118939520 | NA | coding | downstream | 113467 | 34164350 ~ 34169250 (+) |
| LOC110488005 | rab5a | coding | downstream | 125824 | 34177043 ~ 34185964 (+) |
| ube2e2 | LOC106582102 | coding | downstream | 235231 | 34279641 ~ 34317474 (+) |
| LOC110488035 | LOC106582094 | coding | downstream | 266389 | 34317608 ~ 34324592 (+) |
| nr1d2a | LOC106582110 | coding | downstream | 276731 | 34327950 ~ 34335871 (+) |
| G134835 | NA | non-coding | upstream | 20524 | 34030193 ~ 34030403 (+) |
| G134832 | NA | non-coding | upstream | 22243 | 34028451 ~ 34028684 (+) |
| G134764 | NA | non-coding | upstream | 66437 | 33984222 ~ 33984490 (+) |
| G133896 | NA | non-coding | upstream | 178985 | 33868445 ~ 33871942 (+) |
| G133895 | NA | non-coding | upstream | 182934 | 33867491 ~ 33867993 (+) |
| G134898 | NA | non-coding | downstream | 21825 | 34073044 ~ 34073262 (+) |
| G134925 | NA | non-coding | downstream | 57428 | 34108647 ~ 34113623 (+) |
| G134964 | NA | non-coding | downstream | 105397 | 34156616 ~ 34156847 (+) |
| G134970 | NA | non-coding | downstream | 118880 | 34170099 ~ 34170427 (+) |
| G134735 | LOC100136012 | other | upstream | 88269 | 33962417 ~ 33962658 (+) |
| G133760 | LOC106605274 | other | upstream | 236444 | 33814033 ~ 33814483 (+) |
| G133663 | LOC106605282 | other | upstream | 553642 | 33496454 ~ 33497285 (+) |
| G133473 | LOC106605294 | other | upstream | 881549 | 33167438 ~ 33169378 (+) |
| G132342 | LOC100136303 | other | upstream | 2163355 | 31834170 ~ 31887572 (+) |
| si:dkey-30e9.6 | LOC106605205 | other | downstream | 636736 | 34687955 ~ 34692286 (+) |
| G135916 | NA | other | downstream | 920421 | 34971640 ~ 34971931 (+) |
| G135920 | LOC106605214 | other | downstream | 921230 | 34972449 ~ 34972801 (+) |
| LOC110488281 | apom | other | downstream | 933753 | 34984948 ~ 35000555 (+) |
| lypc | LOC106584559 | other | downstream | 1100541 | 35151760 ~ 35153650 (+) |
