G135023


Basic Information

Item Value
gene id G135023
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 34276292 ~ 34328636 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU155476
cacctttatttaaccaggtaggctagttgagaacaagttctcatttgcaactgcgacctggccaagataaagcatagcaattcgacacaaacaacaacacagagttacacatggaatgaacaaaacatacagtcaataatacaaaagaaaacaaaaggtctatatacagtgagtgcaaatgagTTACTTTGTTACAAATCTGGTGTTACTGTTGCTGTCAAGAATTAATGTGTCGTTCTAAGCATCTGTTCTAGAAAAAGCTAGTAAAATCTGGCTATTATCTGTTCACATTTTATT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155476 True 297 lncRNA 0.35 2 34276292 34328636

Neighbor

gene id symbol gene type direction distance location
LOC110488005 rab5a coding upstream 90328 34177043 ~ 34185964 (+)
LOC118939520 NA coding upstream 107042 34164350 ~ 34169250 (+)
LOC110487926 LOC106605271 coding upstream 330892 33887839 ~ 33945400 (+)
LOC110487915 LOC106582023 coding upstream 396184 33873905 ~ 33880108 (+)
LOC110487876 NA coding upstream 517500 33749647 ~ 33758792 (+)
LOC110488056 LOC106605265 coding downstream 21582 34350218 ~ 34366288 (+)
LOC110488078 LOC106605262 coding downstream 55870 34384506 ~ 34396588 (+)
LOC110534788 NA coding downstream 69678 34398314 ~ 34405885 (+)
LOC110488092 LOC106605261 coding downstream 94754 34423390 ~ 34432224 (+)
LOC110488114 LOC106582161 coding downstream 104143 34432779 ~ 34464593 (+)
G134970 NA non-coding upstream 105865 34170099 ~ 34170427 (+)
G134964 NA non-coding upstream 119445 34156616 ~ 34156847 (+)
G134925 NA non-coding upstream 162669 34108647 ~ 34113623 (+)
G134898 NA non-coding upstream 203030 34073044 ~ 34073262 (+)
G135261 NA non-coding downstream 38096 34366732 ~ 34367044 (+)
G135295 LOC106582155 non-coding downstream 79516 34408152 ~ 34408477 (+)
G135316 NA non-coding downstream 140253 34468889 ~ 34470198 (+)
G135341 LOC106582184 non-coding downstream 181844 34510480 ~ 34511713 (+)
G135380 thsd7a non-coding downstream 225937 34554573 ~ 34555365 (+)
G134735 LOC100136012 other upstream 313634 33962417 ~ 33962658 (+)
G133760 LOC106605274 other upstream 461809 33814033 ~ 33814483 (+)
G133663 LOC106605282 other upstream 779007 33496454 ~ 33497285 (+)
G133473 LOC106605294 other upstream 1106914 33167438 ~ 33169378 (+)
G132342 LOC100136303 other upstream 2388720 31834170 ~ 31887572 (+)
si:dkey-30e9.6 LOC106605205 other downstream 359319 34687955 ~ 34692286 (+)
G135916 NA other downstream 643004 34971640 ~ 34971931 (+)
G135920 LOC106605214 other downstream 643813 34972449 ~ 34972801 (+)
LOC110488281 apom other downstream 656336 34984948 ~ 35000555 (+)
lypc LOC106584559 other downstream 823124 35151760 ~ 35153650 (+)

Expression


Co-expression Network