Gene
RNA
| Item | Value |
|---|---|
| gene id | G135265 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 34367497 ~ 34368075 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ORF2 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU155746 | True | 579 | lncRNA | 0.42 | 1 | 34367497 | 34368075 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488012 | LOC106605268 | coding | downstream | 132648 | 34193659 ~ 34234849 (-) |
| LOC110534780 | pp2d1 | coding | downstream | 179486 | 34186054 ~ 34188011 (-) |
| LOC110534769 | efhb | coding | downstream | 195779 | 34170745 ~ 34171718 (-) |
| LOC110487942 | LOC106582030 | coding | downstream | 233263 | 34074555 ~ 34134234 (-) |
| LOC110487899 | LOC106605274 | coding | downstream | 516732 | 33779193 ~ 33850765 (-) |
| nek10 | nek10 | coding | upstream | 2741 | 34370816 ~ 34384026 (-) |
| LOC110488086 | LOC105021885 | coding | upstream | 37992 | 34406067 ~ 34422793 (-) |
| LOC110488127 | ica69 | coding | upstream | 96991 | 34465066 ~ 34475371 (-) |
| LOC110488138 | LOC106605258 | coding | upstream | 115990 | 34484065 ~ 34493285 (-) |
| LOC110534798 | LOC106582184 | coding | upstream | 125447 | 34493522 ~ 34600391 (-) |
| G135262 | NA | non-coding | downstream | 322 | 34366884 ~ 34367175 (-) |
| G135255 | NA | non-coding | downstream | 5905 | 34361266 ~ 34361592 (-) |
| G135210 | NA | non-coding | downstream | 50031 | 34316731 ~ 34317466 (-) |
| G135170 | NA | non-coding | downstream | 150443 | 34216817 ~ 34217054 (-) |
| G135409 | LOC106605262 | non-coding | upstream | 16480 | 34384555 ~ 34393407 (-) |
| G135438 | NA | non-coding | upstream | 75004 | 34443079 ~ 34473477 (-) |
| G135441 | NA | non-coding | upstream | 82552 | 34450627 ~ 34453091 (-) |
| G135406 | NA | non-coding | upstream | 96247 | 34464322 ~ 34464588 (-) |
| G135522 | NA | non-coding | upstream | 232808 | 34600883 ~ 34601451 (-) |
| G134668 | NA | other | downstream | 501560 | 33865488 ~ 33865937 (-) |
| LOC110487618 | LOC100380645 | other | downstream | 1142395 | 33208500 ~ 33225125 (-) |
| G134102 | NA | other | downstream | 1579376 | 32748208 ~ 32788121 (-) |
| LOC110514821 | NA | other | downstream | 1615919 | 32738829 ~ 32756992 (-) |
| LOC110486999 | prdm1 | other | downstream | 2718702 | 31631886 ~ 31648795 (-) |
| G135575 | NA | other | upstream | 236140 | 34604215 ~ 34604478 (-) |
| G136399 | psmc4 | other | upstream | 938292 | 35306367 ~ 35307729 (-) |
| drd2l | LOC106582624 | other | upstream | 1306223 | 35674291 ~ 35700846 (-) |
| G137479 | NA | other | upstream | 2001929 | 36370004 ~ 36370328 (-) |
| G137839 | LOC106605146 | other | upstream | 2266118 | 36634193 ~ 36639005 (-) |
