G135295 (LOC106582155)


Basic Information

Item Value
gene id G135295
gene name LOC106582155
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 34408152 ~ 34408477 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU155791
CAGGAAGTGTCCTGAAGTCATCAATCAGGTGGAGCTCTTTCTTAAACTCCTCGTACAGCGGATCACTCTGGTTCACCACCCCGATGACAAACGTCTCAATGTTACTGCCATTGGCCTCTTTCACTGCCTCCTCCAGCCTCACAGAGTCCCTCTCGTCCGCCTGTCCATCTGTGATCACTATGGCCACTTTCCTCACCCCGGGCCTGGCCGCCCGGAACACCTGGTTGGCCTGATGGATGGCGCTGCCCGTGAAAGTGCCTTCGCCCAGGTAGGTCATAGTGCGGACCGCC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155791 True 290 lncRNA 0.58 2 34408152 34408477

Neighbor

gene id symbol gene type direction distance location
LOC110534788 NA coding upstream 2267 34398314 ~ 34405885 (+)
LOC110488078 LOC106605262 coding upstream 11564 34384506 ~ 34396588 (+)
LOC110488056 LOC106605265 coding upstream 41864 34350218 ~ 34366288 (+)
nr1d2a LOC106582110 coding upstream 72281 34327950 ~ 34335871 (+)
LOC110488035 LOC106582094 coding upstream 83560 34317608 ~ 34324592 (+)
LOC110488092 LOC106605261 coding downstream 14913 34423390 ~ 34432224 (+)
LOC110488114 LOC106582161 coding downstream 24302 34432779 ~ 34464593 (+)
LOC110488146 tmem106b coding downstream 217884 34626361 ~ 34634974 (+)
vwde LOC106605201 coding downstream 235958 34644435 ~ 34646777 (+)
si:dkey-30e9.6 LOC106605205 coding downstream 279632 34687955 ~ 34692286 (+)
G135261 NA non-coding upstream 41108 34366732 ~ 34367044 (+)
G135023 NA non-coding upstream 79516 34276292 ~ 34328636 (+)
ube2e2 LOC106582102 non-coding upstream 90687 34279641 ~ 34317474 (+)
G134970 NA non-coding upstream 237725 34170099 ~ 34170427 (+)
LOC118939520 NA non-coding upstream 242956 34164350 ~ 34169250 (+)
G135316 NA non-coding downstream 60412 34468889 ~ 34470198 (+)
G135341 LOC106582184 non-coding downstream 102003 34510480 ~ 34511713 (+)
G135380 thsd7a non-coding downstream 146096 34554573 ~ 34555365 (+)
G135671 NA non-coding downstream 329805 34738282 ~ 34738494 (+)
G135685 NA non-coding downstream 348154 34756631 ~ 34757180 (+)
G134735 LOC100136012 other upstream 445494 33962417 ~ 33962658 (+)
G133760 LOC106605274 other upstream 593669 33814033 ~ 33814483 (+)
G133663 LOC106605282 other upstream 910867 33496454 ~ 33497285 (+)
G133473 LOC106605294 other upstream 1238774 33167438 ~ 33169378 (+)
G132342 LOC100136303 other upstream 2520580 31834170 ~ 31887572 (+)
G135916 NA other downstream 563163 34971640 ~ 34971931 (+)
G135920 LOC106605214 other downstream 563972 34972449 ~ 34972801 (+)
LOC110488281 apom other downstream 576495 34984948 ~ 35000555 (+)
lypc LOC106584559 other downstream 743283 35151760 ~ 35153650 (+)

Expression


Co-expression Network