G135522


Basic Information

Item Value
gene id G135522
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 34600883 ~ 34601451 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU156045
ctctctctctccatctctctctctctctctctctccatctctctctctctctctctctctctccatctctccctctccctctccccctctctctctctctctccctctctctctctcactctctctctctctctctctttctctctctctctctctctctctctctctctctctccatctctctctcgctctccatctctctccatctctctctctctccctctctctctctctctctctctctacatctctctctctctctctctacatctctctctctctctccatctctctctctctctg
>TU156047
ctctctctctccatctctctctctctctctctctccatctctctctctctctctctctctctccatctctccctctccctctccccctctctctctctctctccctctctctctctcactctctctctctctctctctttctctctctctctctctctctctctctctctctctctctctctctctctccctctctctctctctctctctctctacatctctctctctctctctctacatctctctctctctctccatctctctctctctctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156045 False 303 lncRNA 0.51 3 34600883 34601451
TU156047 True 273 lncRNA 0.51 3 34600883 34601451

Neighbor

gene id symbol gene type direction distance location
LOC110534798 LOC106582184 coding downstream 492 34493522 ~ 34600391 (-)
LOC110488138 LOC106605258 coding downstream 107598 34484065 ~ 34493285 (-)
LOC110488127 ica69 coding downstream 125512 34465066 ~ 34475371 (-)
LOC110488086 LOC105021885 coding downstream 178090 34406067 ~ 34422793 (-)
nek10 nek10 coding downstream 216857 34370816 ~ 34384026 (-)
LOC110534811 LOC106582196 coding upstream 45504 34646955 ~ 34677655 (-)
etv1 etv1 coding upstream 139044 34740495 ~ 34759145 (-)
dgkb dgkb coding upstream 160714 34762165 ~ 34815174 (-)
LOC110488219 agmo coding upstream 223482 34824933 ~ 34849214 (-)
meox2a meox2 coding upstream 280282 34881733 ~ 34895112 (-)
G135438 NA non-coding downstream 127406 34443079 ~ 34473477 (-)
G135406 NA non-coding downstream 136295 34464322 ~ 34464588 (-)
G135441 NA non-coding downstream 147792 34450627 ~ 34453091 (-)
G135409 LOC106605262 non-coding downstream 207476 34384555 ~ 34393407 (-)
G135265 NA non-coding downstream 232808 34367497 ~ 34368075 (-)
G135668 NA non-coding upstream 134170 34735621 ~ 34736034 (-)
G135850 NA non-coding upstream 276287 34877738 ~ 34878215 (-)
G135950 NA non-coding upstream 303393 34904844 ~ 34905084 (-)
G135980 NA non-coding upstream 350395 34951846 ~ 34952080 (-)
ankmy2a ankmy2 non-coding upstream 351629 34953061 ~ 34960249 (-)
G134668 NA other downstream 734946 33865488 ~ 33865937 (-)
LOC110487618 LOC100380645 other downstream 1375781 33208500 ~ 33225125 (-)
G134102 NA other downstream 1812762 32748208 ~ 32788121 (-)
LOC110514821 NA other downstream 1849305 32738829 ~ 32756992 (-)
LOC110486999 prdm1 other downstream 2952088 31631886 ~ 31648795 (-)
G135575 NA other upstream 2764 34604215 ~ 34604478 (-)
G136399 psmc4 other upstream 704916 35306367 ~ 35307729 (-)
drd2l LOC106582624 other upstream 1072847 35674291 ~ 35700846 (-)
G137479 NA other upstream 1768553 36370004 ~ 36370328 (-)
G137839 LOC106605146 other upstream 2032742 36634193 ~ 36639005 (-)

Expression


Co-expression Network