G135671


Basic Information

Item Value
gene id G135671
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 34738282 ~ 34738494 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU156221
GTATATGGACAATGAAAGAAAAATGTAAAATggctgaactatccctttaagccaTGTTCTATGTATTGTAACCAGATAACAGGATTAGCATGGCGATTTTCAGCTCCTATACATGAAGCCTAGAGGGCTTCACAAAATTAACTCCTTTCTCTGAAACCTGTTTATTTCttggtgaaataaaatgttatagGATCTCTATAAGCTCTCTTGCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156221 True 213 lncRNA 0.35 1 34738282 34738494

Neighbor

gene id symbol gene type direction distance location
arl4aa LOC106605206 coding upstream 43078 34692610 ~ 34695204 (+)
si:dkey-30e9.6 LOC106605205 coding upstream 45996 34687955 ~ 34692286 (+)
vwde LOC106605201 coding upstream 91505 34644435 ~ 34646777 (+)
LOC110488146 tmem106b coding upstream 103308 34626361 ~ 34634974 (+)
LOC110488114 LOC106582161 coding upstream 273689 34432779 ~ 34464593 (+)
LOC110488257 LOC106605215 coding downstream 222877 34961371 ~ 34964552 (+)
LOC110488281 apom coding downstream 246454 34984948 ~ 35000555 (+)
lt-b2 lt-b2 coding downstream 266086 35004580 ~ 35009706 (+)
tnf-alpha tnf-alpha coding downstream 284513 35023007 ~ 35025008 (+)
LOC110533739 ppt2a coding downstream 384309 35122803 ~ 35127514 (+)
G135380 thsd7a non-coding upstream 182917 34554573 ~ 34555365 (+)
G135341 LOC106582184 non-coding upstream 226569 34510480 ~ 34511713 (+)
G135316 NA non-coding upstream 268084 34468889 ~ 34470198 (+)
G135295 LOC106582155 non-coding upstream 329805 34408152 ~ 34408477 (+)
G135261 NA non-coding upstream 371238 34366732 ~ 34367044 (+)
G135685 NA non-coding downstream 18137 34756631 ~ 34757180 (+)
G135861 NA non-coding downstream 156785 34895279 ~ 34895499 (+)
G135865 NA non-coding downstream 163066 34901560 ~ 34901780 (+)
G135873 NA non-coding downstream 175232 34913726 ~ 34914891 (+)
G135913 NA non-coding downstream 213645 34952139 ~ 34952511 (+)
G134735 LOC100136012 other upstream 775624 33962417 ~ 33962658 (+)
G133760 LOC106605274 other upstream 923799 33814033 ~ 33814483 (+)
G133663 LOC106605282 other upstream 1240997 33496454 ~ 33497285 (+)
G133473 LOC106605294 other upstream 1568904 33167438 ~ 33169378 (+)
G135916 NA other downstream 233146 34971640 ~ 34971931 (+)
G135920 LOC106605214 other downstream 233955 34972449 ~ 34972801 (+)
lypc LOC106584559 other downstream 413266 35151760 ~ 35153650 (+)
LOC110488391 LOC106582385 other downstream 442185 35180650 ~ 35184002 (+)

Expression


Co-expression Network