Gene
RNA
| Item | Value |
|---|---|
| gene id | G135850 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 34877738 ~ 34878215 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| striated muscle preferentially expressed protein kinase-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU156420 | True | 478 | lncRNA | 0.53 | 1 | 34877738 | 34878215 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488219 | agmo | coding | downstream | 28524 | 34824933 ~ 34849214 (-) |
| dgkb | dgkb | coding | downstream | 62564 | 34762165 ~ 34815174 (-) |
| etv1 | etv1 | coding | downstream | 118593 | 34740495 ~ 34759145 (-) |
| LOC110534811 | LOC106582196 | coding | downstream | 200083 | 34646955 ~ 34677655 (-) |
| LOC110534798 | LOC106582184 | coding | downstream | 277347 | 34493522 ~ 34600391 (-) |
| meox2a | meox2 | coding | upstream | 3518 | 34881733 ~ 34895112 (-) |
| crppa | ispd | coding | upstream | 35481 | 34913696 ~ 34946214 (-) |
| LOC110488240 | LOC106582291 | coding | upstream | 68684 | 34946899 ~ 34949511 (-) |
| ankmy2a | ankmy2 | coding | upstream | 74846 | 34953061 ~ 34960249 (-) |
| LOC110488264 | LOC106605214 | coding | upstream | 88692 | 34966907 ~ 34982793 (-) |
| G135668 | NA | non-coding | downstream | 141704 | 34735621 ~ 34736034 (-) |
| G135522 | NA | non-coding | downstream | 276287 | 34600883 ~ 34601451 (-) |
| G135438 | NA | non-coding | downstream | 404261 | 34443079 ~ 34473477 (-) |
| G135406 | NA | non-coding | downstream | 413150 | 34464322 ~ 34464588 (-) |
| G135441 | NA | non-coding | downstream | 424647 | 34450627 ~ 34453091 (-) |
| G135950 | NA | non-coding | upstream | 26629 | 34904844 ~ 34905084 (-) |
| G135980 | NA | non-coding | upstream | 73631 | 34951846 ~ 34952080 (-) |
| G135982 | NA | non-coding | upstream | 96150 | 34974365 ~ 34974590 (-) |
| G135983 | NA | non-coding | upstream | 105309 | 34983524 ~ 34984165 (-) |
| G135575 | NA | other | downstream | 273260 | 34604215 ~ 34604478 (-) |
| G134668 | NA | other | downstream | 1011801 | 33865488 ~ 33865937 (-) |
| LOC110487618 | LOC100380645 | other | downstream | 1652636 | 33208500 ~ 33225125 (-) |
| G134102 | NA | other | downstream | 2089617 | 32748208 ~ 32788121 (-) |
| LOC110514821 | NA | other | downstream | 2126160 | 32738829 ~ 32756992 (-) |
| G136399 | psmc4 | other | upstream | 428152 | 35306367 ~ 35307729 (-) |
| drd2l | LOC106582624 | other | upstream | 796083 | 35674291 ~ 35700846 (-) |
| G137479 | NA | other | upstream | 1491789 | 36370004 ~ 36370328 (-) |
| G137839 | LOC106605146 | other | upstream | 1755978 | 36634193 ~ 36639005 (-) |
| G138080 | NA | other | upstream | 1947651 | 36825792 ~ 36828397 (-) |
