Gene
RNA
| Item | Value |
|---|---|
| gene id | G135916 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 34971640 ~ 34971931 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| large proline-rich protein BAG6-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU156494 | True | 292 | TUCP | 0.35 | 1 | 34971640 | 34971931 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488257 | LOC106605215 | coding | upstream | 7088 | 34961371 ~ 34964552 (+) |
| arl4aa | LOC106605206 | coding | upstream | 276436 | 34692610 ~ 34695204 (+) |
| si:dkey-30e9.6 | LOC106605205 | coding | upstream | 279354 | 34687955 ~ 34692286 (+) |
| vwde | LOC106605201 | coding | upstream | 324863 | 34644435 ~ 34646777 (+) |
| LOC110488146 | tmem106b | coding | upstream | 336666 | 34626361 ~ 34634974 (+) |
| LOC110488281 | apom | coding | downstream | 13017 | 34984948 ~ 35000555 (+) |
| lt-b2 | lt-b2 | coding | downstream | 32649 | 35004580 ~ 35009706 (+) |
| tnf-alpha | tnf-alpha | coding | downstream | 51076 | 35023007 ~ 35025008 (+) |
| LOC110533739 | ppt2a | coding | downstream | 150872 | 35122803 ~ 35127514 (+) |
| LOC110488331 | LOC106582353 | coding | downstream | 156039 | 35127970 ~ 35141476 (+) |
| G135907 | NA | non-coding | upstream | 18220 | 34953079 ~ 34953420 (+) |
| G135914 | NA | non-coding | upstream | 18785 | 34952517 ~ 34952855 (+) |
| G135913 | NA | non-coding | upstream | 19129 | 34952139 ~ 34952511 (+) |
| G135873 | NA | non-coding | upstream | 56749 | 34913726 ~ 34914891 (+) |
| G135865 | NA | non-coding | upstream | 69860 | 34901560 ~ 34901780 (+) |
| G135919 | LOC106605214 | non-coding | downstream | 1677 | 34973608 ~ 34973832 (+) |
| G136015 | NA | non-coding | downstream | 55255 | 35027186 ~ 35027532 (+) |
| G136018 | NA | non-coding | downstream | 61974 | 35033905 ~ 35034771 (+) |
| G136019 | NA | non-coding | downstream | 63088 | 35035019 ~ 35035261 (+) |
| G136020 | LOC106605218 | non-coding | downstream | 64539 | 35036470 ~ 35038923 (+) |
| G134735 | LOC100136012 | other | upstream | 1008982 | 33962417 ~ 33962658 (+) |
| G133760 | LOC106605274 | other | upstream | 1157157 | 33814033 ~ 33814483 (+) |
| G133663 | LOC106605282 | other | upstream | 1474355 | 33496454 ~ 33497285 (+) |
| G133473 | LOC106605294 | other | upstream | 1802262 | 33167438 ~ 33169378 (+) |
| G135920 | LOC106605214 | other | downstream | 518 | 34972449 ~ 34972801 (+) |
| lypc | LOC106584559 | other | downstream | 179829 | 35151760 ~ 35153650 (+) |
| LOC110488391 | LOC106582385 | other | downstream | 208748 | 35180650 ~ 35184002 (+) |
| LOC110488639 | LOC106605005 | other | downstream | 813760 | 35785691 ~ 35788114 (+) |
