G136021 (LOC106582320)


Basic Information

Item Value
gene id G136021
gene name LOC106582320
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35042312 ~ 35048954 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU156606
AGGTGCAGTGCTCCAGGAGGGGCTGAATCAGGACATCCAAGTCTCCTTTAGGGGCCTCCCTAGTGAACTTCTCCACTGTGATGTGTAAAGGATCCACAATCTGCCAAATCATGAGTGACAGGATGTCTATGGCTAGTAACACTCCAACTGTTGCATAGAGTTTCCATGGCTCCAGGTGcttcctcttctccttcttctcctccttctttgTGAAGAGATTGTGTAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156606 True 226 lncRNA 0.47 3 35042312 35048954

Neighbor

gene id symbol gene type direction distance location
tnf-alpha tnf-alpha coding upstream 17304 35023007 ~ 35025008 (+)
lt-b2 lt-b2 coding upstream 32606 35004580 ~ 35009706 (+)
LOC110488281 apom coding upstream 42327 34984948 ~ 35000555 (+)
LOC110488257 LOC106605215 coding upstream 77760 34961371 ~ 34964552 (+)
arl4aa LOC106605206 coding upstream 347108 34692610 ~ 34695204 (+)
LOC110533739 ppt2a coding downstream 73849 35122803 ~ 35127514 (+)
LOC110488331 LOC106582353 coding downstream 79016 35127970 ~ 35141476 (+)
LOC110488356 ccdc105 coding downstream 101557 35150511 ~ 35151707 (+)
lypc LOC106584559 coding downstream 102847 35151760 ~ 35153650 (+)
LOC110488375 LOC106605227 coding downstream 123620 35172574 ~ 35180466 (+)
G136020 LOC106605218 non-coding upstream 3389 35036470 ~ 35038923 (+)
G136019 NA non-coding upstream 7051 35035019 ~ 35035261 (+)
G136018 NA non-coding upstream 7541 35033905 ~ 35034771 (+)
G136015 NA non-coding upstream 14780 35027186 ~ 35027532 (+)
G135919 LOC106605214 non-coding upstream 68480 34973608 ~ 34973832 (+)
G136044 LOC106605219 non-coding downstream 38325 35087279 ~ 35089332 (+)
G136055 NA non-coding downstream 52889 35101843 ~ 35102075 (+)
G136079 NA non-coding downstream 94781 35143735 ~ 35145446 (+)
G136086 NA non-coding downstream 108878 35157832 ~ 35158037 (+)
G135920 LOC106605214 other upstream 69511 34972449 ~ 34972801 (+)
G135916 NA other upstream 70381 34971640 ~ 34971931 (+)
si:dkey-30e9.6 LOC106605205 other upstream 351366 34687955 ~ 34692286 (+)
G134735 LOC100136012 other upstream 1079654 33962417 ~ 33962658 (+)
LOC110488391 LOC106582385 other downstream 131725 35180650 ~ 35184002 (+)
LOC110488639 LOC106605005 other downstream 736737 35785691 ~ 35788114 (+)
LOC100653444 LOC106584591 other downstream 806195 35855149 ~ 35865269 (+)
G136994 NA other downstream 933878 35982832 ~ 36037741 (+)

Expression


Co-expression Network