G136280


Basic Information

Item Value
gene id G136280
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35100165 ~ 35100983 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU156915
TTTGCTGTATGAAAGCCAAAGATCTCTGTTAGCTCTGATGATTATTAGAAATTAACAAAAAATCTGATAGATTTTTTTCAATATTGTTCAGGAAATAATTATGCTATGAACTCCATCAAATCAATCTAACCCTCTTTTGATTTAACCTGATGCTCTAAATTGTTTGTAGTCTTTTATTGATCCTCAGGTTGCAGtgtatgtacactgagtgtacaaaatattaggaaggttgagttgcaaccccttttaccctcagaacagcctcaattagtcagggcatggactacaaggtgtcagaagtgttccacatggatgctggtccatgttgactccaatgattcgCACAGTTGGCTggttgtcctttgggtggtggaccattcttgactaCACacgatacacacgggaaactgttgagcgtgaaaaacccagcagcattgcagttcttgacacactcaaaccggtgtgcctggcacctactaccatacccagttcaaaggcacttaaatcttttgtcttgcccattcaccctctgaatggcacacaatccatgtctgaattgtctcaaggcttaaacatccttgtttaaccggtctcctccccttcatctacactgattgaagtggatttaacaagtgacatcaataagggatcctagatttgacctgtattcacctggtcagtctatgtcatggaaagaccaggttttcctactgttttgtacactcagtgtataatttCACACCTTATGAAATACAAAATGTTCCATGTATTGTCACGGACACAAAGGAGTTAGGAATCTATTATTACATGACTAAAGGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156915 True 819 lncRNA 0.40 1 35100165 35100983

Neighbor

gene id symbol gene type direction distance location
LOC110488311 mgat1 coding downstream 644 35096514 ~ 35099521 (-)
LOC110488304 LOC106605219 coding downstream 4390 35087176 ~ 35095775 (-)
LOC110488299 LOC106582320 coding downstream 13604 35036471 ~ 35086561 (-)
LOC110488264 LOC106605214 coding downstream 117372 34966907 ~ 34982793 (-)
ankmy2a ankmy2 coding downstream 139916 34953061 ~ 34960249 (-)
LOC110488316 LOC106605221 coding upstream 2885 35103868 ~ 35106886 (-)
LOC110534832 dhx16 coding upstream 7224 35108207 ~ 35122317 (-)
LOC110488360 LOC106605226 coding upstream 57500 35158483 ~ 35174193 (-)
si:ch211-225p5.8 LOC106605232 coding upstream 98361 35199344 ~ 35205128 (-)
LOC110488446 LOC106582421 coding upstream 139565 35240548 ~ 35265648 (-)
G136002 NA non-coding downstream 82970 35016714 ~ 35017195 (-)
G135983 NA non-coding downstream 116000 34983524 ~ 34984165 (-)
G135982 NA non-coding downstream 125575 34974365 ~ 34974590 (-)
G135980 NA non-coding downstream 148085 34951846 ~ 34952080 (-)
G136317 NA non-coding upstream 26807 35127790 ~ 35128022 (-)
G136318 NA non-coding upstream 39425 35140408 ~ 35141438 (-)
G136319 NA non-coding upstream 40567 35141550 ~ 35141729 (-)
G136332 NA non-coding upstream 74663 35175646 ~ 35176189 (-)
G135575 NA other downstream 495687 34604215 ~ 34604478 (-)
G134668 NA other downstream 1234228 33865488 ~ 33865937 (-)
LOC110487618 LOC100380645 other downstream 1875063 33208500 ~ 33225125 (-)
G134102 NA other downstream 2312044 32748208 ~ 32788121 (-)
LOC110514821 NA other downstream 2348587 32738829 ~ 32756992 (-)
G136399 psmc4 other upstream 205384 35306367 ~ 35307729 (-)
drd2l LOC106582624 other upstream 573315 35674291 ~ 35700846 (-)
G137479 NA other upstream 1269021 36370004 ~ 36370328 (-)
G137839 LOC106605146 other upstream 1533210 36634193 ~ 36639005 (-)
G138080 NA other upstream 1724883 36825792 ~ 36828397 (-)

Expression


Co-expression Network