G136055


Basic Information

Item Value
gene id G136055
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35101843 ~ 35102075 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU156649
TTTTTATTTTGGGCATTTGGCATATTCAAGGAGCACGGGACCCCTGGCGCACAAATTCTTGGCTCCGAAATCTTTGCTTGACAATTCTAATTTACCGACTCATAATCTCTCGTCTTGGTGTTCGACTCAGGTTTATATTCCAAGAACACTCAATTTCCAAACTCAAGTCGTTGTTCTTGAAAAAAGGACTTCCATATTGAGGGAGTTCGTTTTGGCCGCACGGAGTCGCATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156649 True 233 lncRNA 0.40 1 35101843 35102075

Neighbor

gene id symbol gene type direction distance location
tnf-alpha tnf-alpha coding upstream 76835 35023007 ~ 35025008 (+)
lt-b2 lt-b2 coding upstream 92137 35004580 ~ 35009706 (+)
LOC110488281 apom coding upstream 101858 34984948 ~ 35000555 (+)
LOC110488257 LOC106605215 coding upstream 137291 34961371 ~ 34964552 (+)
arl4aa LOC106605206 coding upstream 406639 34692610 ~ 34695204 (+)
LOC110533739 ppt2a coding downstream 20728 35122803 ~ 35127514 (+)
LOC110488331 LOC106582353 coding downstream 25895 35127970 ~ 35141476 (+)
LOC110488356 ccdc105 coding downstream 48436 35150511 ~ 35151707 (+)
lypc LOC106584559 coding downstream 49726 35151760 ~ 35153650 (+)
LOC110488375 LOC106605227 coding downstream 70499 35172574 ~ 35180466 (+)
G136044 LOC106605219 non-coding upstream 12511 35087279 ~ 35089332 (+)
G136021 LOC106582320 non-coding upstream 52889 35042312 ~ 35048954 (+)
G136020 LOC106605218 non-coding upstream 62920 35036470 ~ 35038923 (+)
G136019 NA non-coding upstream 66582 35035019 ~ 35035261 (+)
G136018 NA non-coding upstream 67072 35033905 ~ 35034771 (+)
G136079 NA non-coding downstream 41660 35143735 ~ 35145446 (+)
G136086 NA non-coding downstream 55757 35157832 ~ 35158037 (+)
G136097 NA non-coding downstream 97267 35199342 ~ 35200486 (+)
LOC110534843 LOC106605230 non-coding downstream 131119 35205181 ~ 35239245 (+)
G135920 LOC106605214 other upstream 129042 34972449 ~ 34972801 (+)
G135916 NA other upstream 129912 34971640 ~ 34971931 (+)
si:dkey-30e9.6 LOC106605205 other upstream 410897 34687955 ~ 34692286 (+)
G134735 LOC100136012 other upstream 1139185 33962417 ~ 33962658 (+)
LOC110488391 LOC106582385 other downstream 78604 35180650 ~ 35184002 (+)
LOC110488639 LOC106605005 other downstream 683616 35785691 ~ 35788114 (+)
LOC100653444 LOC106584591 other downstream 753074 35855149 ~ 35865269 (+)
G136994 NA other downstream 880757 35982832 ~ 36037741 (+)

Expression


Co-expression Network