G136079


Basic Information

Item Value
gene id G136079
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35143735 ~ 35145446 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU156677
tatttggcaaaagaccaagtccatattatgagaaactacagtccatcattactttaagacatgaaggtcagtcattgtggaacatttcaagaacttttaaagtttcttcaagtacagtcgcaaaaaccatcaagtggtatgatgaaactggctcttatgaagacccagagttacctctgctgcagaggatacgttcattagagttaccagcctcataaatgCAGCCTAaatgaatgcttcacagagttcaagtaacagacatctcaacatcaaatgttcagaggagactacttgaaatcaggccttcatggtcgaattgctacaaagaaaccactactaaaggacaccaataacttgcttggtccaagaaacgagcaatggacattagactggtggaaatatgtccttaggtctgatgagtccaaatgggagattttttggttccaaccaccgtgtctttgtgagatgcagagaaggtgaacggatgatctccacatgtgtgtggttcccaccatgaagcatggtggtgtaatggtgtgggggtgctttgctggtgacactgacagtgatttatttggaattcaaggaacattttaccagcatggctaccacagcattctgcagtgatacgccatcacatctggttcacgtttagtgggactatcatttgtttttcaacaggacaatgaccaaacacaccttcgggctgtgaaagggctatttgaccaaggagagtgatggagtgttgcatcagatgatctggcctccacaatcaccggacctcaacccaattgagatggttagggatgagttggaccgcagagtgaaggaaaagcagtgggaactccttcaagactgttggaaaagcattccaggtaaagctggttgagagaataccaagagtgtgcaaagcagtcaaggaaaagggtggctaccttgcagaatatacaatatattgtgatttgtttaacacttatttgggtactacatgattacatatgtgttatttcatagttttgatgtcttcactattattctgcaatgtagaaaatagtaaaaaaaaaaaaaaaaatcctggaatgagtaagtgtgtccaaacttttgactggtactgtagatgcaCAAAGAGCCCAAAATAAATCTGATAATTCTGGATCCTATTTTGATGGATTTCACATCAATTTATCAATCATGCATTCCCTGGATATGTTAGATAAATAGCTTACTTTTGAAATATTAGTCTACCATTCTACTCAGTTGACTTACATGGCACTGTAAAAATGTGTCAAGAGTCCTGACGCTATAATGCAAAGTAACTGTCCATTAAAACTGTTTTATTGTTGTAGCAGCATTCCCTCTAATTTTTTGGGGCACGGTAACTTGAACTTCGTGCAACTTCTGGCGCGCGTCTACAGTGAACACAGGCAAGGGCCACcccctccagaaatgtccgggaactcgcaggtgccttggtggaagagtggggtaacatttcacagcaagaactggcaaatatggtgcagttcatgaggaggagatgcactgccgtgcttaatgcagctggtggccacaccagatactgactgttacttttgattttgacccctcctttgttcagggacacattattccaattCTGTCAGtcatatgtctgtggaacttgttcagtttatgcctCAGTTGTTACAtcctatgttcatacaaatatttac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156677 True 1712 lncRNA 0.41 1 35143735 35145446

Neighbor

gene id symbol gene type direction distance location
LOC110488331 LOC106582353 coding upstream 2259 35127970 ~ 35141476 (+)
LOC110533739 ppt2a coding upstream 16221 35122803 ~ 35127514 (+)
tnf-alpha tnf-alpha coding upstream 118727 35023007 ~ 35025008 (+)
lt-b2 lt-b2 coding upstream 134029 35004580 ~ 35009706 (+)
LOC110488281 apom coding upstream 143750 34984948 ~ 35000555 (+)
LOC110488356 ccdc105 coding downstream 5065 35150511 ~ 35151707 (+)
lypc LOC106584559 coding downstream 6355 35151760 ~ 35153650 (+)
LOC110488375 LOC106605227 coding downstream 27128 35172574 ~ 35180466 (+)
LOC110488391 LOC106582385 coding downstream 35204 35180650 ~ 35184002 (+)
dnajc28 dnajc28 coding downstream 42379 35187825 ~ 35195853 (+)
G136055 NA non-coding upstream 41660 35101843 ~ 35102075 (+)
G136044 LOC106605219 non-coding upstream 54403 35087279 ~ 35089332 (+)
G136021 LOC106582320 non-coding upstream 94781 35042312 ~ 35048954 (+)
G136020 LOC106605218 non-coding upstream 104812 35036470 ~ 35038923 (+)
G136086 NA non-coding downstream 12386 35157832 ~ 35158037 (+)
G136097 NA non-coding downstream 53896 35199342 ~ 35200486 (+)
LOC110534843 LOC106605230 non-coding downstream 87748 35205181 ~ 35239245 (+)
G136144 NA non-coding downstream 143931 35289377 ~ 35289644 (+)
G136199 NA non-coding downstream 245622 35391068 ~ 35391284 (+)
G135920 LOC106605214 other upstream 170934 34972449 ~ 34972801 (+)
G135916 NA other upstream 171804 34971640 ~ 34971931 (+)
si:dkey-30e9.6 LOC106605205 other upstream 452789 34687955 ~ 34692286 (+)
G134735 LOC100136012 other upstream 1181077 33962417 ~ 33962658 (+)
LOC110488639 LOC106605005 other downstream 640245 35785691 ~ 35788114 (+)
LOC100653444 LOC106584591 other downstream 709703 35855149 ~ 35865269 (+)
G136994 NA other downstream 837386 35982832 ~ 36037741 (+)

Expression


Co-expression Network