G136097


Basic Information

Item Value
gene id G136097
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35199342 ~ 35200486 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU156696
tgtttaatttaatttCTTACATTTGATTACAGACAGTACACCTATGttgcaattatatattttttaaatgtgcatGAATGATTGTAGAGGATGTTTTCATTGATCACACCTTTGATCACACATTGGATACATTTTCTGTCAATTTTGTTGGGTACTGTAAGtgtattgcctaatgtgaaaacGGAATACTGTAATTAACAGTACTGTAACATTACTTTCAGAACTTCTAAGGGTGATTTGAAACACCTTATCTTGCATTGtttgctattggattaactggTAATAAAAATAAAACTAATTTGAGAAGATATTGTTGTGTTTCAGTGATTTGAAACCAATTCTCATTACATTTCACAATAAACTTGAATCAATGGTTGTGGGGTGAGAGATGTTTTATAATCCAAATGAATGGACAATGACAGGTTTTGAATGAAAGACTTGCTGCATTACAAGTGTGACCAGTTTGGTATTTTGTtctaagagttgtgaaaatgtaccacatacttgtgaaaatagcgATTAAAAAAATCTGTAATAACATGTTTGCAGATGAGACCTATGTAGATGCACGGTTGTTCCTGCCAAAGCTTTCTATGTAGCTCAGGTGGAACCATCTGTAATCAGAGCTTTGTCAGAACTGTTGATCCATCACGTGATGACATTCTCTGTTGAGCTGACACACTAAGGCTATTCGGCACCACCTGTTAATCTAATCACCACTCACACCAGCTGCAACTACCTCGTACAGTAAATCAAGTACATTGTAAACTGCATGTGTTACACACTATGCTAAGACATtcaaattctatttctatgatatAATAGCCTTGTAGTGTAGTGGCAACAGTTGCTTGTGACAGAGTTCTCCACCTTTGATGTTTACCTGTTAGATACACACAAATGAAACAAGTCACTCCAGAAGCACTCCGTCACAATTGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156696 True 941 lncRNA 0.35 2 35199342 35200486

Neighbor

gene id symbol gene type direction distance location
dnajc28 dnajc28 coding upstream 3489 35187825 ~ 35195853 (+)
LOC110488391 LOC106582385 coding upstream 15340 35180650 ~ 35184002 (+)
LOC110488375 LOC106605227 coding upstream 18876 35172574 ~ 35180466 (+)
lypc LOC106584559 coding upstream 45707 35151760 ~ 35153650 (+)
LOC110488356 ccdc105 coding upstream 47635 35150511 ~ 35151707 (+)
LOC110534843 LOC106605230 coding downstream 4695 35205181 ~ 35239245 (+)
LOC110488465 psmc4 coding downstream 93613 35294099 ~ 35307452 (+)
LOC110488474 LOC106605235 coding downstream 124790 35325276 ~ 35334443 (+)
LOC110488522 lsr coding downstream 195849 35396335 ~ 35405972 (+)
LOC110488530 LOC106605238 coding downstream 206433 35406919 ~ 35431905 (+)
G136086 NA non-coding upstream 41305 35157832 ~ 35158037 (+)
G136079 NA non-coding upstream 53896 35143735 ~ 35145446 (+)
LOC110533739 ppt2a non-coding upstream 75277 35122803 ~ 35127514 (+)
G136055 NA non-coding upstream 97267 35101843 ~ 35102075 (+)
G136044 LOC106605219 non-coding upstream 110010 35087279 ~ 35089332 (+)
G136144 NA non-coding downstream 88891 35289377 ~ 35289644 (+)
G136199 NA non-coding downstream 190582 35391068 ~ 35391284 (+)
G136201 LOC106584099 non-coding downstream 192822 35393308 ~ 35393788 (+)
G136202 NA non-coding downstream 194258 35394744 ~ 35395183 (+)
LOC110488281 apom other upstream 198787 34984948 ~ 35000555 (+)
G135920 LOC106605214 other upstream 226541 34972449 ~ 34972801 (+)
G135916 NA other upstream 227411 34971640 ~ 34971931 (+)
LOC110488639 LOC106605005 other downstream 585205 35785691 ~ 35788114 (+)
LOC100653444 LOC106584591 other downstream 654663 35855149 ~ 35865269 (+)
G136994 NA other downstream 782346 35982832 ~ 36037741 (+)
G137058 LOC106605156 other downstream 899125 36099611 ~ 36100277 (+)
LOC110488849 LOC106605147 other downstream 1181406 36354883 ~ 36405310 (+)

Expression


Co-expression Network