Gene
RNA
| Item | Value |
|---|---|
| gene id | G136199 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 35391068 ~ 35391284 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU156824 | True | 217 | lncRNA | 0.41 | 1 | 35391068 | 35391284 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488474 | LOC106605235 | coding | upstream | 56625 | 35325276 ~ 35334443 (+) |
| LOC110488465 | psmc4 | coding | upstream | 83616 | 35294099 ~ 35307452 (+) |
| LOC110534843 | LOC106605230 | coding | upstream | 151823 | 35205181 ~ 35239245 (+) |
| dnajc28 | dnajc28 | coding | upstream | 195215 | 35187825 ~ 35195853 (+) |
| LOC110488391 | LOC106582385 | coding | upstream | 207066 | 35180650 ~ 35184002 (+) |
| LOC110488522 | lsr | coding | downstream | 5051 | 35396335 ~ 35405972 (+) |
| LOC110488530 | LOC106605238 | coding | downstream | 15635 | 35406919 ~ 35431905 (+) |
| LOC118936739 | LOC106605239 | coding | downstream | 50857 | 35442141 ~ 35444030 (+) |
| LOC118936740 | LOC106582469 | coding | downstream | 53817 | 35445101 ~ 35454058 (+) |
| LOC118939544 | LOC106605239 | coding | downstream | 74982 | 35441730 ~ 35470406 (+) |
| G136144 | NA | non-coding | upstream | 101424 | 35289377 ~ 35289644 (+) |
| G136097 | NA | non-coding | upstream | 190582 | 35199342 ~ 35200486 (+) |
| G136086 | NA | non-coding | upstream | 233031 | 35157832 ~ 35158037 (+) |
| G136079 | NA | non-coding | upstream | 245622 | 35143735 ~ 35145446 (+) |
| G136201 | LOC106584099 | non-coding | downstream | 2024 | 35393308 ~ 35393788 (+) |
| G136202 | NA | non-coding | downstream | 3460 | 35394744 ~ 35395183 (+) |
| LOC110488573 | LOC106605190 | non-coding | downstream | 157264 | 35548120 ~ 35554239 (+) |
| lypc | LOC106584559 | other | upstream | 237418 | 35151760 ~ 35153650 (+) |
| LOC110488281 | apom | other | upstream | 390513 | 34984948 ~ 35000555 (+) |
| G135920 | LOC106605214 | other | upstream | 418267 | 34972449 ~ 34972801 (+) |
| G135916 | NA | other | upstream | 419137 | 34971640 ~ 34971931 (+) |
| LOC110488639 | LOC106605005 | other | downstream | 394407 | 35785691 ~ 35788114 (+) |
| LOC100653444 | LOC106584591 | other | downstream | 463865 | 35855149 ~ 35865269 (+) |
| G136994 | NA | other | downstream | 591548 | 35982832 ~ 36037741 (+) |
| G137058 | LOC106605156 | other | downstream | 708327 | 36099611 ~ 36100277 (+) |
| LOC110488849 | LOC106605147 | other | downstream | 990608 | 36354883 ~ 36405310 (+) |
