G136202


Basic Information

Item Value
gene id G136202
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35394744 ~ 35395183 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU156827
GTTATAAGGAATTCCTATCACTtgacaaggtccctgtaacacctaaagatgttgcaattgttttagatgccattccctcaggtgttgctctgttattcaggaacgtgtcaagacctgaccctcagagcctaccttctattgaccctgttgacacatcagtaggaaagatttgtttctcttttggtccattcaacaacagagcgatacgaaccttgtttcagcaggatgttgtaccttatgtcatgccttattggaatggatttattgataatatctgttggaaaaagtttggatgttgccacacacatacctacttgttaacaaaatgaaggaagtttcctttaaaattattcctaaatattatcctgccaaccactatatgaacaagtttaaggaaaacatcaactcaaattgctccttttgtaatgaccacccagaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156827 True 440 lncRNA 0.38 1 35394744 35395183

Neighbor

gene id symbol gene type direction distance location
LOC110488474 LOC106605235 coding upstream 60301 35325276 ~ 35334443 (+)
LOC110488465 psmc4 coding upstream 87292 35294099 ~ 35307452 (+)
LOC110534843 LOC106605230 coding upstream 155499 35205181 ~ 35239245 (+)
dnajc28 dnajc28 coding upstream 198891 35187825 ~ 35195853 (+)
LOC110488391 LOC106582385 coding upstream 210742 35180650 ~ 35184002 (+)
LOC110488522 lsr coding downstream 1152 35396335 ~ 35405972 (+)
LOC110488530 LOC106605238 coding downstream 11736 35406919 ~ 35431905 (+)
LOC118936739 LOC106605239 coding downstream 46958 35442141 ~ 35444030 (+)
LOC118936740 LOC106582469 coding downstream 49918 35445101 ~ 35454058 (+)
LOC118939544 LOC106605239 coding downstream 71083 35441730 ~ 35470406 (+)
G136201 LOC106584099 non-coding upstream 956 35393308 ~ 35393788 (+)
G136199 NA non-coding upstream 3460 35391068 ~ 35391284 (+)
G136144 NA non-coding upstream 105100 35289377 ~ 35289644 (+)
G136097 NA non-coding upstream 194258 35199342 ~ 35200486 (+)
LOC110488573 LOC106605190 non-coding downstream 153365 35548120 ~ 35554239 (+)
G136554 NA non-coding downstream 178941 35574124 ~ 35574329 (+)
G136561 NA non-coding downstream 182775 35577958 ~ 35578281 (+)
lypc LOC106584559 other upstream 241094 35151760 ~ 35153650 (+)
LOC110488281 apom other upstream 394189 34984948 ~ 35000555 (+)
G135920 LOC106605214 other upstream 421943 34972449 ~ 34972801 (+)
G135916 NA other upstream 422813 34971640 ~ 34971931 (+)
LOC110488639 LOC106605005 other downstream 390508 35785691 ~ 35788114 (+)
LOC100653444 LOC106584591 other downstream 459966 35855149 ~ 35865269 (+)
G136994 NA other downstream 587649 35982832 ~ 36037741 (+)
G137058 LOC106605156 other downstream 704428 36099611 ~ 36100277 (+)
LOC110488849 LOC106605147 other downstream 986709 36354883 ~ 36405310 (+)

Expression


Co-expression Network