G136675


Basic Information

Item Value
gene id G136675
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35605701 ~ 35606560 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU157375
acttaaagACTTTCACTAGGCTCTGTGTATGTTATCTTTATTCTGACTTTTTAACTGTGTTTTTATAGATTAGTGTCATTCCTTACATACATTTTCAATTAATTCCATTTAATCTCGCAACAGTTTTTAAGAGCGtgatatttttgtttgttttccccTGAGTTGTTCCGCTTCTATGAATATGTAACTTAGTGTTACAGAAAATGTGTATTTATGAACTTACAAATTGTGTGTGATGGTTAAGAATCACTTCAACATGTTGTATTTTTGTTattaatgtttttttgtgtgtttttttaaaatgtatttgcaaTGAATACAGGTGAATATAGGTTACAAGCAGTCAGTCATTTCAGCATGAAGCAGTAATTATGTAAAGTAAGAAGACAGTAATGATGTACATTACAATGTTGAACAAATATTAAAACATGGTGTCAGTTGCATAGCATCTACACAATAGCACATCCTGAAATATGGGAAATTCCTAAACAGTGAAGCATTTCTATTTTGACAGCCAAGTAAGCACATATTGCATTGATGTAACACACAATGTTCAAACCCACTTTGAATGACGTCAATAAATTCTGTTTCCTGCCA
>TU157376
caaaaacaatgtgTATATGTTGCCCTATGAGGTGTGCAAAGTTGTTAGAATCTAATTCAAAATTATTCACAGCCCTAatgactgccaaaggtgcttccaccaagaATTTACTCTAGGTTGTGAAAACATACGTAATTAAGACAGCTCCGTTAAacgtttttatttattcatttggaAAATGTTTTATAATTTTTCTTTCACTTTTAAAATGTTGTGTAAGTTGTGTAcatccataggaaaacaatcaaatgtatttttttttaacttaaagACTTTCACTAGGCTCTGTGTATGTTATCTTTATTCTGACTTTTTAACTGTGTTTTTATAGATTAGTGTCATTCCTTACATACATTTTCAATTAATTCCATTTAATCTCGCAACAGTTTTTAAGAGCGtgatatttttgtttgttttccccTGAGTTGTTCCGCTTCTATGAATATGTAACTTAGTGTTACAGAAAATGTGTATTTATGAACTTACAAATTGTGTGTGATGGTTAAGAATCACTTCAACATGTTGTATTTTTGTTattaatgtttttttgtgtgtttttttaaaatgtatttgcaaTGAATACAGGTGAATATAGGTTACAAGCAGTCAGTCATTTCAGCATGAAGCAGTAATTATGTAAAGTAAGAAGACAGTAATGATGTACATTACAATGTTGAACAAATATTAAAACATGGTGTCAGTTGCATAGCATCTACACAATAGCACATCCTGAAATATGGGAAATTCCTAAACAGTGAAGCATTTCTATTTTGACAGCCAAGTAAGCACATATTGCATTGATGTAACACACAATGTTCAAACCCACTTTGAATGACGTCAATAAATTCTGTTTCCTGCCA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU157375 False 597 lncRNA 0.31 1 35605701 35606297
TU157376 True 860 lncRNA 0.48 1 35605701 35606560

Neighbor

gene id symbol gene type direction distance location
LOC110488492 LOC106605237 coding downstream 225640 35366832 ~ 35380061 (-)
LOC110488508 LOC106605236 coding downstream 247710 35347843 ~ 35357991 (-)
LOC118939540 NA coding downstream 281019 35307742 ~ 35324682 (-)
LOC110488446 LOC106582421 coding downstream 340053 35240548 ~ 35265648 (-)
si:ch211-225p5.8 LOC106605232 coding downstream 400573 35199344 ~ 35205128 (-)
LOC118939553 LOC106582593 coding upstream 981 35607541 ~ 35609429 (-)
LOC110534863 LOC106605168 coding upstream 3069 35609629 ~ 35610797 (-)
LOC110488593 LOC106605167 coding upstream 22989 35629549 ~ 35663662 (-)
LOC110488606 LOC106605166 coding upstream 57688 35664248 ~ 35668411 (-)
drd2l LOC106582624 coding upstream 67731 35674291 ~ 35700846 (-)
G136671 NA non-coding downstream 6673 35598666 ~ 35599028 (-)
G136669 NA non-coding downstream 7968 35597522 ~ 35597733 (-)
G136581 NA non-coding downstream 14413 35591051 ~ 35591288 (-)
G136562 NA non-coding downstream 26537 35578904 ~ 35579164 (-)
G136553 NA non-coding downstream 31765 35573656 ~ 35573936 (-)
G136676 NA non-coding upstream 30 35606590 ~ 35607485 (-)
G136680 NA non-coding upstream 10683 35617243 ~ 35617497 (-)
G136743 NA non-coding upstream 144801 35751361 ~ 35751639 (-)
G136744 NA non-coding upstream 145200 35751760 ~ 35752076 (-)
G136399 psmc4 other downstream 297972 35306367 ~ 35307729 (-)
G135575 NA other downstream 1001223 34604215 ~ 34604478 (-)
G134668 NA other downstream 1739764 33865488 ~ 33865937 (-)
LOC110487618 LOC100380645 other downstream 2380599 33208500 ~ 33225125 (-)
G134102 NA other downstream 2817580 32748208 ~ 32788121 (-)
G137479 NA other upstream 763444 36370004 ~ 36370328 (-)
G137839 LOC106605146 other upstream 1027633 36634193 ~ 36639005 (-)
G138080 NA other upstream 1219306 36825792 ~ 36828397 (-)
pnrc2 LOC106605140 other upstream 1238373 36844929 ~ 36849373 (-)

Expression


Co-expression Network