Gene
RNA
| Item | Value |
|---|---|
| gene id | G136584 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 35638113 ~ 35703928 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: DNA repair protein XRCC1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU157277 | True | 1196 | lncRNA | 0.45 | 2 | 35638113 | 35703928 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488583 | LOC106582465 | coding | upstream | 64953 | 35567202 ~ 35573160 (+) |
| LOC110488573 | LOC106605190 | coding | upstream | 83874 | 35548120 ~ 35554239 (+) |
| LOC110534853 | NA | coding | upstream | 97665 | 35526086 ~ 35540448 (+) |
| LOC110488566 | LOC106605239 | coding | upstream | 125923 | 35506657 ~ 35512190 (+) |
| LOC118939546 | LOC106582469 | coding | upstream | 140030 | 35492817 ~ 35498083 (+) |
| LOC110488622 | LOC106605163 | coding | downstream | 40299 | 35744227 ~ 35751886 (+) |
| LOC110488629 | LOC106605006 | coding | downstream | 56209 | 35760137 ~ 35777993 (+) |
| LOC110533750 | LOC106584585 | coding | downstream | 80027 | 35783955 ~ 35785664 (+) |
| LOC110488639 | LOC106605005 | coding | downstream | 81969 | 35785691 ~ 35788114 (+) |
| si:ch211-231m23.4 | LOC106605003 | coding | downstream | 85133 | 35789061 ~ 35791241 (+) |
| G136589 | LOC106582601 | non-coding | upstream | 1614 | 35635157 ~ 35636499 (+) |
| G136610 | NA | non-coding | upstream | 5705 | 35631404 ~ 35632408 (+) |
| G136609 | NA | non-coding | upstream | 6713 | 35630152 ~ 35631400 (+) |
| G136593 | NA | non-coding | upstream | 37151 | 35600763 ~ 35600962 (+) |
| G136583 | NA | non-coding | upstream | 43273 | 35594535 ~ 35594840 (+) |
| G136657 | NA | non-coding | downstream | 23311 | 35727239 ~ 35728312 (+) |
| G136658 | NA | non-coding | downstream | 25305 | 35729233 ~ 35729521 (+) |
| G136789 | NA | non-coding | downstream | 107806 | 35811734 ~ 35813460 (+) |
| LOC100653444 | LOC106584591 | non-coding | downstream | 151300 | 35855149 ~ 35865269 (+) |
| G136805 | NA | non-coding | downstream | 176421 | 35880349 ~ 35887245 (+) |
| LOC110488391 | LOC106582385 | other | upstream | 454117 | 35180650 ~ 35184002 (+) |
| lypc | LOC106584559 | other | upstream | 484463 | 35151760 ~ 35153650 (+) |
| LOC110488281 | apom | other | upstream | 637558 | 34984948 ~ 35000555 (+) |
| G135920 | LOC106605214 | other | upstream | 665312 | 34972449 ~ 34972801 (+) |
| G135916 | NA | other | upstream | 666182 | 34971640 ~ 34971931 (+) |
| G136994 | NA | other | downstream | 278904 | 35982832 ~ 36037741 (+) |
| G137058 | LOC106605156 | other | downstream | 395683 | 36099611 ~ 36100277 (+) |
| LOC110488849 | LOC106605147 | other | downstream | 677964 | 36354883 ~ 36405310 (+) |
