G136657



Basic Information


Item Value
gene id G136657
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35727239 ~ 35728312 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU157357
GAAAAAAGCTTTATTTTGTCACATGAATATAGAACCAGAACATACATATGGAAGAATATGAAATAGCTTTTTACTGTAGTGAAGAATGGATTTTGGTTTAGTAACCATCAATCCTCTTGAGTACAAGGTCAGGATGGGAGGTGAAGAGAGGCACATTTATATAAAacacatgcaaaagtgattgtttAATAAGAGAGGTGTGTCCAACACCTTTATCATCATCACATTAAACAATCATGTTCATCCCATCTAGAACATCATTATACAAACATTATACATATAAGGATGCAAAATGTACTGCATGAAATAGGTGAATATCATGTGTGGACCATTATCTTCATCAGCCACaaactacagtggcttgcgaaagtattcaccaccttggcatttttcctatttttttgccttacaacctggatgCCTTACAATTTTGGGGGGTtcgtatcatttgatttacacaacatgcctaccactttgaagatgcaaaatatattttttatattgtgaaacaaacaagaaataagacaaaaaattCATACTTTGTAGAGAAAAAGTGGTGCAGAAATAACAgctacaagtctcttggggtacgtCTCTATACACTTGGtaaatctagccactgggatttttgcccattcttcaaggcaagactgctccagctccttcaagttggatgggttctgctggtgtacagcaatctttaagtcataccacagattctcaattggattgatgtctgggctttgactaagacattccaatacatttacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaagaattggaggtgcaaaattattcagaccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU157357 True 1074 lncRNA 0.50 1 35727239 35728312

Neighbor


gene id symbol gene type direction distance location
LOC110488583 LOC106582465 coding upstream 154079 35567202 ~ 35573160 (+)
LOC110488573 LOC106605190 coding upstream 173000 35548120 ~ 35554239 (+)
LOC110534853 NA coding upstream 186791 35526086 ~ 35540448 (+)
LOC110488566 LOC106605239 coding upstream 215049 35506657 ~ 35512190 (+)
LOC118939546 LOC106582469 coding upstream 229156 35492817 ~ 35498083 (+)
LOC110488622 LOC106605163 coding downstream 15915 35744227 ~ 35751886 (+)
LOC110488629 LOC106605006 coding downstream 31825 35760137 ~ 35777993 (+)
LOC110533750 LOC106584585 coding downstream 55643 35783955 ~ 35785664 (+)
LOC110488639 LOC106605005 coding downstream 57585 35785691 ~ 35788114 (+)
si:ch211-231m23.4 LOC106605003 coding downstream 60749 35789061 ~ 35791241 (+)
G136584 NA non-coding upstream 23311 35638113 ~ 35703928 (+)
G136589 LOC106582601 non-coding upstream 90740 35635157 ~ 35636499 (+)
G136610 NA non-coding upstream 94831 35631404 ~ 35632408 (+)
G136609 NA non-coding upstream 95839 35630152 ~ 35631400 (+)
G136593 NA non-coding upstream 126277 35600763 ~ 35600962 (+)
G136658 NA non-coding downstream 921 35729233 ~ 35729521 (+)
G136789 NA non-coding downstream 83422 35811734 ~ 35813460 (+)
LOC100653444 LOC106584591 non-coding downstream 126916 35855149 ~ 35865269 (+)
G136805 NA non-coding downstream 152037 35880349 ~ 35887245 (+)
G136842 NA non-coding downstream 196443 35924755 ~ 35924957 (+)
LOC110488391 LOC106582385 other upstream 543243 35180650 ~ 35184002 (+)
lypc LOC106584559 other upstream 573589 35151760 ~ 35153650 (+)
LOC110488281 apom other upstream 726684 34984948 ~ 35000555 (+)
G135920 LOC106605214 other upstream 754438 34972449 ~ 34972801 (+)
G135916 NA other upstream 755308 34971640 ~ 34971931 (+)
G136994 NA other downstream 254520 35982832 ~ 36037741 (+)
G137058 LOC106605156 other downstream 371299 36099611 ~ 36100277 (+)
LOC110488849 LOC106605147 other downstream 653580 36354883 ~ 36405310 (+)

Expression



Co-expression Network