G136789


Basic Information

Item Value
gene id G136789
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35811734 ~ 35813460 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU157508
tacAATAGACACTGCCATTTTTAtcatatttatttaaaataaacatCAGTACAAAGTTTGCTGATCACAGACATTGGCGTTCGGATATACATGTATTTACAATTTGGTTGAAGCAGAAACACAATTTTGATTAAGAAACACCATAGTCAGTTCTGCAGTTACAGAGAGCAACATATCCCCATATTAAAATCAACCTCACATACACAAGAGCTTTTCACATTAGTGATAAAATAAtatgaagaatataaaatatgaaAACATTCAAGACATAAAATATTGCACATCACAGTGAAAATAAGTTTTATTCGTTTACACAATTGTGGCAGTTCTCACAGGGGGAGGAGCGACAAACGTGGGGAGAGGGATTGACCGCTCAGCCGGAGCCTGGAAAAGATATCAGATACAAAGCATGGCTGGTAAATCATTTCTGAATAGACATTCCTACATTTCTATATAACAGTTCTAACCCAGTAGCAATTCCACAGGGAccatattcacaaagcgtctTAGAGTAGGAGTCTTATTCATTATGgtttaaaaggcaaaactgatcctagatcagcactcctactcaacTATGTtttgtgaatacgggccctgaCGTGTACTTCAGATATTTTGAAAGTGTATGTCATGACAAGGCGAGGTGAATTACCGCCTGCGATGTCATTCTGTTGTAATCAGGCCGTGGTTTGAGTCCTCCAGTCAGCAGGTGGTTGGGAGTGTTTACGTCTGGTTGGGTTGACACCAcctgcatgggggggggggggggggggggggggggggagagttcTACAGTACTGGTAGGAACATGACATTTGTGCAATAACAAATTTCCCCAGTTACTGACATTACCTTCTCTACTGCTCTGGGCACAGGATATCTGTTCTGTTGACCTATGAAAGAGAAACACAATTTTAGATTGAAAGCCACTTGATTCCGGATGTGATAATAAAAAAAGGAAGGTAGATCAGGGGATTGAGAGTAGTGCTCCTACGTTTCTTCCTGCAGCAGTAGACACAGAGGTATATGAGGccgatgaggaggaggaggaagaggaggccacAGGGGATCCCGACAGCGAGGCCTATAATCTGTGGTCTGCTCAGACCACCTGTCATACCGGGTCCAATTCTCTGCACCGCTGATGGTTCCCCCTGAGTTCGGCCAGCAATGGGGATGACCCGGAAGTAGTATGTGGATTTGGGATCCAGAACAGAGATATCAGTGCTCCGGGAGGAACCGGGCCTCTGCTGAATGCTCCGGAATCCCTCTATGGCTCTTTTCCTTCGGCTGCCATTTTTAGTGACAGTTAGGAGGTCTGGTCCGCTCATCTGAATGTCAAAGCCTTCAAAGCAACGGAGGGACAGAAACCAGTGTTGAGCAGTACTTACAGGGATGTTCCATATCATTTGACATTAACTACAGTCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157508 True 1432 lncRNA 0.44 2 35811734 35813460

Neighbor

gene id symbol gene type direction distance location
si:ch211-231m23.4 LOC106605003 coding upstream 20493 35789061 ~ 35791241 (+)
LOC110488639 LOC106605005 coding upstream 23620 35785691 ~ 35788114 (+)
LOC110533750 LOC106584585 coding upstream 26070 35783955 ~ 35785664 (+)
LOC110488629 LOC106605006 coding upstream 33741 35760137 ~ 35777993 (+)
LOC110488622 LOC106605163 coding upstream 59848 35744227 ~ 35751886 (+)
LOC110488684 LOC106605158 coding downstream 15517 35828977 ~ 35845886 (+)
LOC100653444 LOC106584591 coding downstream 41743 35855149 ~ 35865269 (+)
iglon5 iglon5 coding downstream 115440 35928900 ~ 36069412 (+)
LOC110488747 LOC106605155 coding downstream 295829 36109289 ~ 36113122 (+)
LOC110533753 LOC106605184 coding downstream 304606 36118066 ~ 36123229 (+)
G136658 NA non-coding upstream 82213 35729233 ~ 35729521 (+)
G136657 NA non-coding upstream 83422 35727239 ~ 35728312 (+)
G136584 NA non-coding upstream 107806 35638113 ~ 35703928 (+)
G136589 LOC106582601 non-coding upstream 175235 35635157 ~ 35636499 (+)
G136610 NA non-coding upstream 179326 35631404 ~ 35632408 (+)
G136805 NA non-coding downstream 66889 35880349 ~ 35887245 (+)
G136842 NA non-coding downstream 111295 35924755 ~ 35924957 (+)
G137053 NA non-coding downstream 276596 36090056 ~ 36090288 (+)
G137054 NA non-coding downstream 277933 36091393 ~ 36091725 (+)
LOC110488391 LOC106582385 other upstream 627738 35180650 ~ 35184002 (+)
lypc LOC106584559 other upstream 658084 35151760 ~ 35153650 (+)
LOC110488281 apom other upstream 811179 34984948 ~ 35000555 (+)
G135920 LOC106605214 other upstream 838933 34972449 ~ 34972801 (+)
G136994 NA other downstream 169372 35982832 ~ 36037741 (+)
G137058 LOC106605156 other downstream 286151 36099611 ~ 36100277 (+)
LOC110488849 LOC106605147 other downstream 568432 36354883 ~ 36405310 (+)
G139004 NA other downstream 1963601 37777061 ~ 37824010 (+)

Expression


Co-expression Network