G136805


Basic Information

Item Value
gene id G136805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35880349 ~ 35887245 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU157524
ttatttttttataggggtgccaggtaggttgtgcctaccagagaaaacattggtttctccttttagtttgggagggaatgagtcccatctggtccgtcaagtctacaccattacaaaggacttatgtaaacgtcagaagggaaatcaacttttcataaacccttaaaacattgaaagaacttcaaaaacaactattcttttgcgtgggttgtattagcaacatcaatggattacacacacataataatataacacaatgagttctggttcctccagaaatgtcctgtacctcgggcctaaaaagagtcccgcccggtaaaggagttcagtgaactcaagtgacttttgtcacgcaatgttggtccgttcattccgtgtagcgtaaacccagtattaaatcatacaatcaatataaccattttaccacagaactttaaagcgtatcTGCTCTTactaattcctcaactacatctaactacataaatcatcaccgtatacatcatatcaaaacaaatgaaataccgtatacaaaaaaggtggtagtcagtcggtcagtcagacaatccaatccgccaacagatctccagcggagaaaggtCACGAAGAATAGAGAGGagtagtccacggacgcaaagagtggatccgatcctgggtaaactctcaggctacaaaacacacgtttaacagcaacaaaacaaccggaatagagaagcttcgggaacacatcctcagtcacgtctccatcacaaacgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157524 True 754 lncRNA 0.41 2 35880349 35887245

Neighbor

gene id symbol gene type direction distance location
LOC100653444 LOC106584591 coding upstream 15080 35855149 ~ 35865269 (+)
LOC110488684 LOC106605158 coding upstream 34463 35828977 ~ 35845886 (+)
si:ch211-231m23.4 LOC106605003 coding upstream 89108 35789061 ~ 35791241 (+)
LOC110488639 LOC106605005 coding upstream 92235 35785691 ~ 35788114 (+)
LOC110533750 LOC106584585 coding upstream 94685 35783955 ~ 35785664 (+)
iglon5 iglon5 coding downstream 41655 35928900 ~ 36069412 (+)
LOC110488747 LOC106605155 coding downstream 222044 36109289 ~ 36113122 (+)
LOC110533753 LOC106605184 coding downstream 230821 36118066 ~ 36123229 (+)
LOC110488805 LOC106605152 coding downstream 329775 36217020 ~ 36227769 (+)
LOC101268898 NA coding downstream 342270 36229498 ~ 36233187 (+)
G136789 NA non-coding upstream 66889 35811734 ~ 35813460 (+)
G136658 NA non-coding upstream 150828 35729233 ~ 35729521 (+)
G136657 NA non-coding upstream 152037 35727239 ~ 35728312 (+)
G136584 NA non-coding upstream 176421 35638113 ~ 35703928 (+)
G136842 NA non-coding downstream 37510 35924755 ~ 35924957 (+)
G137053 NA non-coding downstream 202811 36090056 ~ 36090288 (+)
G137054 NA non-coding downstream 204148 36091393 ~ 36091725 (+)
G137055 NA non-coding downstream 204983 36092228 ~ 36092555 (+)
G136958 LOC106605156 non-coding downstream 214389 36101634 ~ 36102007 (+)
LOC110488391 LOC106582385 other upstream 696353 35180650 ~ 35184002 (+)
lypc LOC106584559 other upstream 726699 35151760 ~ 35153650 (+)
LOC110488281 apom other upstream 879794 34984948 ~ 35000555 (+)
G136994 NA other downstream 95587 35982832 ~ 36037741 (+)
G137058 LOC106605156 other downstream 212366 36099611 ~ 36100277 (+)
LOC110488849 LOC106605147 other downstream 494647 36354883 ~ 36405310 (+)
G139004 NA other downstream 1889816 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 2032490 37919735 ~ 37940714 (+)

Expression


Co-expression Network