G136958 (LOC106605156)


Basic Information

Item Value
gene id G136958
gene name LOC106605156
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36101634 ~ 36102007 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU157686
GAGCATGCAATTACTCACAATAAACTGTGAGGGTCTTTGAGGCGGACTGAGCGCTGACGAGGTTAGAGACGGTGCAGGAGTAGAGCCCGGCATCTTCCCTCCTGGCCGGGTTGATCACCAAGTCGCCCCCTTTGATAGTGACCCTGGAGTTTGAGGTGAGAGCAGAGCCCCCTTTACCCCACAGCACACTGGTCTCTGTCCCCTTGGTCCAGGTACAGCGCACAGACACATTGCCCCCCTCCAGAGCCACTGACGGCACAAACATAGTCACGCCATCCACTGCATCtagggtggagagagaagagaagcaggGAGACTATAGACTGGGCCTAGATCTGTTTGTggtgtcttgccaactcctacggCCATTGACA

Function

NR:

description
uncharacterized protein LOC109901756

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157686 True 374 lncRNA 0.56 1 36101634 36102007

Neighbor

gene id symbol gene type direction distance location
iglon5 iglon5 coding upstream 32222 35928900 ~ 36069412 (+)
LOC100653444 LOC106584591 coding upstream 236365 35855149 ~ 35865269 (+)
LOC110488684 LOC106605158 coding upstream 255748 35828977 ~ 35845886 (+)
si:ch211-231m23.4 LOC106605003 coding upstream 310393 35789061 ~ 35791241 (+)
LOC110488639 LOC106605005 coding upstream 313520 35785691 ~ 35788114 (+)
LOC110488747 LOC106605155 coding downstream 7282 36109289 ~ 36113122 (+)
LOC110533753 LOC106605184 coding downstream 16059 36118066 ~ 36123229 (+)
LOC110488805 LOC106605152 coding downstream 115013 36217020 ~ 36227769 (+)
LOC101268898 NA coding downstream 127508 36229498 ~ 36233187 (+)
LOC118936744 LOC106605183 coding downstream 173734 36275741 ~ 36278586 (+)
G137055 NA non-coding upstream 9079 36092228 ~ 36092555 (+)
G137054 NA non-coding upstream 9909 36091393 ~ 36091725 (+)
G137053 NA non-coding upstream 11346 36090056 ~ 36090288 (+)
G136842 NA non-coding upstream 176677 35924755 ~ 35924957 (+)
G136805 NA non-coding upstream 214389 35880349 ~ 35887245 (+)
G137059 NA non-coding downstream 307 36102314 ~ 36102682 (+)
G137067 NA non-coding downstream 12180 36114187 ~ 36114418 (+)
G137070 NA non-coding downstream 14654 36116661 ~ 36116868 (+)
G137183 NA non-coding downstream 23907 36125914 ~ 36126237 (+)
G137058 LOC106605156 other upstream 1357 36099611 ~ 36100277 (+)
G136994 NA other upstream 63893 35982832 ~ 36037741 (+)
LOC110488391 LOC106582385 other upstream 917638 35180650 ~ 35184002 (+)
LOC110488849 LOC106605147 other downstream 279885 36354883 ~ 36405310 (+)
G139004 NA other downstream 1675054 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1817728 37919735 ~ 37940714 (+)
G139101 NA other downstream 1841735 37943742 ~ 37944012 (+)
G139179 NA other downstream 1949352 38051359 ~ 38051744 (+)

Expression


Co-expression Network