G137168



Basic Information


Item Value
gene id G137168
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36106315 ~ 36106534 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU157903
gcaacactcactagttACAAACTACCTCTacaagcaacttcagcacaagaactgttcgctgggagcttcattaaatgggtttccatggccagaAATGGAAACGCGTTATCTGGAGTGTTGACTcgtgcttcaccatctggctgtccgatggacaaatctgggtttggaggatgccaggtgAACGCTACcagcccgaatgcatagtgccaactgtaaagtt

Function


NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU157903 True 220 lncRNA 0.48 1 36106315 36106534

Neighbor


gene id symbol gene type direction distance location
si:dkeyp-97a10.3 LOC106605156 coding downstream 1874 36092450 ~ 36104441 (-)
LOC110488725 LOC106605185 coding downstream 18061 36081719 ~ 36088254 (-)
LOC110488718 LOC106605186 coding downstream 25433 36074139 ~ 36080882 (-)
etfb LOC106582677 coding downstream 283149 35819076 ~ 35823166 (-)
vsig10l vsig10l coding downstream 288366 35811748 ~ 35817949 (-)
LOC110534917 NA coding upstream 16748 36123282 ~ 36133319 (-)
LOC110488787 LOC106605151 coding upstream 37353 36143887 ~ 36188948 (-)
LOC110488753 LOC106582818 coding upstream 83053 36189587 ~ 36216362 (-)
LOC110488840 LOC106605148 coding upstream 192529 36299063 ~ 36355790 (-)
LOC118939565 NA coding upstream 381420 36487954 ~ 36541198 (-)
G137166 NA non-coding downstream 3814 36102113 ~ 36102501 (-)
G137165 NA non-coding downstream 5535 36100577 ~ 36100780 (-)
G136849 NA non-coding downstream 241561 35791903 ~ 35864754 (-)
G136851 LOC106605162 non-coding downstream 331613 35771628 ~ 35774702 (-)
G137180 NA non-coding upstream 17472 36124006 ~ 36124407 (-)
G137181 NA non-coding upstream 17895 36124429 ~ 36124632 (-)
G137202 NA non-coding upstream 35229 36141763 ~ 36141975 (-)
drd2l LOC106582624 other downstream 430610 35674291 ~ 35700846 (-)
G136399 psmc4 other downstream 798586 35306367 ~ 35307729 (-)
G135575 NA other downstream 1501837 34604215 ~ 34604478 (-)
G134668 NA other downstream 2240378 33865488 ~ 33865937 (-)
LOC110487618 LOC100380645 other downstream 2881213 33208500 ~ 33225125 (-)
G137479 NA other upstream 263470 36370004 ~ 36370328 (-)
G137839 LOC106605146 other upstream 527659 36634193 ~ 36639005 (-)
G138080 NA other upstream 719332 36825792 ~ 36828397 (-)
pnrc2 LOC106605140 other upstream 738399 36844929 ~ 36849373 (-)
LOC110501508 LOC106605132 other upstream 1354340 37442359 ~ 37463839 (-)

Expression



Co-expression Network