G137070


Basic Information

Item Value
gene id G137070
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36116661 ~ 36116868 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU157799
ctgttcatcatatatgcatagtcactctaACAATATCTACATGTACCTACTACcgcaatcagcctgactaaccggtgtctgtatgtagcctcgctacttttatagcctcgctactgtatatagcctgtctttttactgttgttttatttctttacttatctattgttcaccaaacaccttttttgcactattgtttagagcctgtaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157799 True 208 lncRNA 0.38 1 36116661 36116868

Neighbor

gene id symbol gene type direction distance location
LOC110488747 LOC106605155 coding upstream 3539 36109289 ~ 36113122 (+)
iglon5 iglon5 coding upstream 47249 35928900 ~ 36069412 (+)
LOC100653444 LOC106584591 coding upstream 251392 35855149 ~ 35865269 (+)
LOC110488684 LOC106605158 coding upstream 270775 35828977 ~ 35845886 (+)
si:ch211-231m23.4 LOC106605003 coding upstream 325420 35789061 ~ 35791241 (+)
LOC110533753 LOC106605184 coding downstream 1198 36118066 ~ 36123229 (+)
LOC110488805 LOC106605152 coding downstream 100152 36217020 ~ 36227769 (+)
LOC101268898 NA coding downstream 112647 36229498 ~ 36233187 (+)
LOC118936744 LOC106605183 coding downstream 158873 36275741 ~ 36278586 (+)
LOC110488849 LOC106605147 coding downstream 238015 36354883 ~ 36405310 (+)
G137067 NA non-coding upstream 2243 36114187 ~ 36114418 (+)
G137059 NA non-coding upstream 13979 36102314 ~ 36102682 (+)
G136958 LOC106605156 non-coding upstream 14654 36101634 ~ 36102007 (+)
G137055 NA non-coding upstream 24106 36092228 ~ 36092555 (+)
G137054 NA non-coding upstream 24936 36091393 ~ 36091725 (+)
G137183 NA non-coding downstream 9046 36125914 ~ 36126237 (+)
G137190 NA non-coding downstream 13029 36129897 ~ 36130119 (+)
G137203 NA non-coding downstream 27052 36143920 ~ 36146850 (+)
G137205 LOC106605151 non-coding downstream 36189 36153057 ~ 36154498 (+)
G137058 LOC106605156 other upstream 16384 36099611 ~ 36100277 (+)
G136994 NA other upstream 78920 35982832 ~ 36037741 (+)
LOC110488639 LOC106605005 other upstream 329191 35785691 ~ 35788114 (+)
LOC110488391 LOC106582385 other upstream 932665 35180650 ~ 35184002 (+)
G139004 NA other downstream 1660193 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1802867 37919735 ~ 37940714 (+)
G139101 NA other downstream 1826874 37943742 ~ 37944012 (+)
G139179 NA other downstream 1934491 38051359 ~ 38051744 (+)

Expression


Co-expression Network