G137205 (LOC106605151)



Basic Information


Item Value
gene id G137205
gene name LOC106605151
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36153057 ~ 36154498 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU157942
GCAAAAGTTAAAAACGTCCTTCCATCTGTCCTGTTCTTCTTTAACACCAagcttcacacaaacacacaaagtgAACGAAcaaacggagggagggaggtgtagagtgtttaaatgttttatttaactaggcaaatcagttaagaacaaatacttatttacaacgACGCCGGGACAATTGTGAGCCGCCCCATCTCCACAGTTCTGAATGACGTAATCTACAAATGACCAGAATAATGACAAAATAGATTTCTCCCCGTCTGTAAAAGTGCACTTCACTTGTAAACAAGGTGATAAACGCCAACAAGCCCTGCTCTCCCAGGCCTCGAGTGGCACTCCAGGTCCATCAATTCACATCAGGCCTAATGCTATAATGGAATATAATTACCAAGAGAGCAGGCCCATTGACAACAGGGTAATTGGATAATTAGGACAACCATTTAGAGCGCTTAATAAACTAGGGGGTAATAAAGATCACGGACCAACTCAaacacacagcccccccccccctaatctaTAAAAGGGCTTTTCACACTGCTGTGCCAAACAGAGTTGAACCAAGCTGTAGTGAGCTGGCCTAAGAAAATGTAAGAGCCAGCACAGTTTGGGTGGGTGTCGGCCCTATAGTGTGACTCAGGCATGAGTATCATGTCAGAATGACCGTAAGGTAGCTGGGAGGGTGGCCGGAAGTCAAGTGGGCCCGCTCACCCTTTCGTTGCGGTCGGCACAGAAGAGGCGGGTGTGGTGGCGTTTCTGGACCACGATGTAGGTGATGCCGGGCTGGTACTCCTTCTCTAGGCCAATGCAGGCCTCGCGGATGGCCAGCAGCTCGTAGTACAGCACCTGGGGTGGGCAGAGGGATACCTGTCTGAACTGGCCCTCTGACACTCCGTCCCTGTAGAAGATGATCCTGGTGGGCTTGTAGCGGGTCGACTTGTAGAACTGGATCAGCAGTTCTCGGACCATAGAGGCCAGATCCTGGATCACCTCCTGCCTGGGCCTCTGGACCCGGACTGTGGCACAGTACCTGCTGGGGTGGGCGTCCATACTGCCCACCAC

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU157942 True 1056 lncRNA 0.51 2 36153057 36154498

Neighbor


gene id symbol gene type direction distance location
LOC110533753 LOC106605184 coding upstream 30807 36118066 ~ 36123229 (+)
LOC110488747 LOC106605155 coding upstream 39935 36109289 ~ 36113122 (+)
iglon5 iglon5 coding upstream 83645 35928900 ~ 36069412 (+)
LOC100653444 LOC106584591 coding upstream 287788 35855149 ~ 35865269 (+)
LOC110488684 LOC106605158 coding upstream 307171 35828977 ~ 35845886 (+)
LOC110488805 LOC106605152 coding downstream 62522 36217020 ~ 36227769 (+)
LOC101268898 NA coding downstream 75017 36229498 ~ 36233187 (+)
LOC118936744 LOC106605183 coding downstream 121243 36275741 ~ 36278586 (+)
LOC110488849 LOC106605147 coding downstream 200385 36354883 ~ 36405310 (+)
LOC110488866 LOC106582899 coding downstream 266253 36420751 ~ 36656060 (+)
G137203 NA non-coding upstream 6207 36143920 ~ 36146850 (+)
G137190 NA non-coding upstream 22938 36129897 ~ 36130119 (+)
G137183 NA non-coding upstream 26820 36125914 ~ 36126237 (+)
G137070 NA non-coding upstream 36189 36116661 ~ 36116868 (+)
G137206 NA non-coding downstream 504 36155002 ~ 36155236 (+)
G137207 NA non-coding downstream 759 36155257 ~ 36155582 (+)
G137210 NA non-coding downstream 3240 36157738 ~ 36158260 (+)
G137214 NA non-coding downstream 8744 36163242 ~ 36163509 (+)
G137215 NA non-coding downstream 9617 36164115 ~ 36164469 (+)
G137058 LOC106605156 other upstream 52780 36099611 ~ 36100277 (+)
G136994 NA other upstream 115316 35982832 ~ 36037741 (+)
LOC110488639 LOC106605005 other upstream 365587 35785691 ~ 35788114 (+)
LOC110488391 LOC106582385 other upstream 969061 35180650 ~ 35184002 (+)
G139004 NA other downstream 1622563 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1765237 37919735 ~ 37940714 (+)
G139101 NA other downstream 1789244 37943742 ~ 37944012 (+)
G139179 NA other downstream 1896861 38051359 ~ 38051744 (+)

Expression



Co-expression Network