G137227


Basic Information

Item Value
gene id G137227
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36176000 ~ 36176277 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU157964
GTAGAATAGACACATAAATTACCTCTAGTCACACTTCAACAAGCCATAATCTGATACCACGTGAAACATTTTGAGATCCTAGCGAAAGGCATTATTCTAGGCGTACCTGTTGACGCGGCGCGGGCACTTCTCGGGCTTGATGTCCACCTCATAGAGGTAGACGTCTATCTTGGGGATATCCACCTGGAAGCAGTTGGCCAGCAGCTTGATGGGCTTTCCCATGGTGCCATAGCCAGGCCGCCGCGGCACAGTGAACAGGGGCTGGGCTCCAACGGCTC

Function

NR:

description
protein argonaute-3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157964 True 278 lncRNA 0.53 1 36176000 36176277

Neighbor

gene id symbol gene type direction distance location
LOC110533753 LOC106605184 coding upstream 53750 36118066 ~ 36123229 (+)
LOC110488747 LOC106605155 coding upstream 62878 36109289 ~ 36113122 (+)
iglon5 iglon5 coding upstream 106588 35928900 ~ 36069412 (+)
LOC100653444 LOC106584591 coding upstream 310731 35855149 ~ 35865269 (+)
LOC110488684 LOC106605158 coding upstream 330114 35828977 ~ 35845886 (+)
LOC110488805 LOC106605152 coding downstream 40743 36217020 ~ 36227769 (+)
LOC101268898 NA coding downstream 53238 36229498 ~ 36233187 (+)
LOC118936744 LOC106605183 coding downstream 99464 36275741 ~ 36278586 (+)
LOC110488849 LOC106605147 coding downstream 178606 36354883 ~ 36405310 (+)
LOC110488866 LOC106582899 coding downstream 244474 36420751 ~ 36656060 (+)
G137225 LOC107394889 non-coding upstream 118 36175132 ~ 36175882 (+)
G137215 NA non-coding upstream 11531 36164115 ~ 36164469 (+)
G137214 NA non-coding upstream 12491 36163242 ~ 36163509 (+)
G137210 NA non-coding upstream 17740 36157738 ~ 36158260 (+)
G137207 NA non-coding upstream 20418 36155257 ~ 36155582 (+)
G137237 NA non-coding downstream 10588 36186865 ~ 36187081 (+)
G137238 NA non-coding downstream 11166 36187443 ~ 36187679 (+)
G137239 NA non-coding downstream 11758 36188035 ~ 36188764 (+)
G137234 LOC106582818 non-coding downstream 12989 36189266 ~ 36192683 (+)
G137236 NA non-coding downstream 19776 36196053 ~ 36196517 (+)
G137058 LOC106605156 other upstream 75723 36099611 ~ 36100277 (+)
G136994 NA other upstream 138259 35982832 ~ 36037741 (+)
LOC110488639 LOC106605005 other upstream 388530 35785691 ~ 35788114 (+)
LOC110488391 LOC106582385 other upstream 992004 35180650 ~ 35184002 (+)
G139004 NA other downstream 1600784 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1743458 37919735 ~ 37940714 (+)
G139101 NA other downstream 1767465 37943742 ~ 37944012 (+)
G139179 NA other downstream 1875082 38051359 ~ 38051744 (+)

Expression


Co-expression Network