G137245 (LOC106605149)


Basic Information

Item Value
gene id G137245
gene name LOC106605149
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36202488 ~ 36207731 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU157990
CGGGGCGTCGCGTGACGTTGCAGACGCGGTACTTCCTCTTCATCTGACCGCAGTGAGTCACCTCCACCTTCAGACCTGGTAACGCCCACCGATCACTGTTCAACGGCCCACCTTTGATCTCCTTGGTGAAGCGGACCCTCTGCGAGTCGGTCAGGGTCTTGGGCTGCTCGTCTATGTTGCGGATGTCCAGGACTTCGCACATGAACTCGATCACCGGCTGGGCTTTGTAGAAGGCCGTG

Function

NR:

description
PREDICTED: protein argonaute-1 isoform X8

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157990 True 239 lncRNA 0.59 2 36202488 36207731

Neighbor

gene id symbol gene type direction distance location
LOC110533753 LOC106605184 coding upstream 80238 36118066 ~ 36123229 (+)
LOC110488747 LOC106605155 coding upstream 89366 36109289 ~ 36113122 (+)
iglon5 iglon5 coding upstream 133076 35928900 ~ 36069412 (+)
LOC100653444 LOC106584591 coding upstream 337219 35855149 ~ 35865269 (+)
LOC110488684 LOC106605158 coding upstream 356602 35828977 ~ 35845886 (+)
LOC110488805 LOC106605152 coding downstream 9289 36217020 ~ 36227769 (+)
LOC101268898 NA coding downstream 21784 36229498 ~ 36233187 (+)
LOC118936744 LOC106605183 coding downstream 68010 36275741 ~ 36278586 (+)
LOC110488849 LOC106605147 coding downstream 147152 36354883 ~ 36405310 (+)
LOC110488866 LOC106582899 coding downstream 213020 36420751 ~ 36656060 (+)
G137240 NA non-coding upstream 4911 36197348 ~ 36197577 (+)
G137236 NA non-coding upstream 5971 36196053 ~ 36196517 (+)
G137234 LOC106582818 non-coding upstream 9805 36189266 ~ 36192683 (+)
G137239 NA non-coding upstream 13724 36188035 ~ 36188764 (+)
G137238 NA non-coding upstream 14809 36187443 ~ 36187679 (+)
G137223 LOC107707628 non-coding downstream 2281 36210012 ~ 36210308 (+)
G137249 NA non-coding downstream 5747 36213478 ~ 36213816 (+)
G137250 NA non-coding downstream 6788 36214519 ~ 36214830 (+)
G137256 NA non-coding downstream 35873 36243604 ~ 36248682 (+)
G137058 LOC106605156 other upstream 102211 36099611 ~ 36100277 (+)
G136994 NA other upstream 164747 35982832 ~ 36037741 (+)
LOC110488639 LOC106605005 other upstream 415018 35785691 ~ 35788114 (+)
LOC110488391 LOC106582385 other upstream 1018492 35180650 ~ 35184002 (+)
G139004 NA other downstream 1569330 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1712004 37919735 ~ 37940714 (+)
G139101 NA other downstream 1736011 37943742 ~ 37944012 (+)
G139179 NA other downstream 1843628 38051359 ~ 38051744 (+)

Expression


Co-expression Network