G137223 (LOC107707628)


Basic Information

Item Value
gene id G137223
gene name LOC107707628
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36210012 ~ 36210308 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU157960
CTTGAAATTAGCCACAAGCTTCTCTGCCCTTGCtttcatagtgtgtgtgtttgcatgcgtgtGCGCGTGCCCTCCTACCCGTCTGTGCACGTGTGTGCTTAGTGTACCGTACCTCATGGAGGCCAGGTGGCGCATGGCCACATCCAGGGCTTGGACAGAGTCCAGGGGTACCTGCAGGCGCCCGCTGACCAGCGTCTCCTGGAGCAGACGCCATGACACCGTGGCCAGAAAGCGGATAGACACCTTGAAGATACGATCCTTCCCCTCCCCGGGGATAGTCACCTCAAAGTCCACCTC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157960 True 297 lncRNA 0.41 1 36210012 36210308

Neighbor

gene id symbol gene type direction distance location
LOC110533753 LOC106605184 coding upstream 87762 36118066 ~ 36123229 (+)
LOC110488747 LOC106605155 coding upstream 96890 36109289 ~ 36113122 (+)
iglon5 iglon5 coding upstream 140600 35928900 ~ 36069412 (+)
LOC100653444 LOC106584591 coding upstream 344743 35855149 ~ 35865269 (+)
LOC110488684 LOC106605158 coding upstream 364126 35828977 ~ 35845886 (+)
LOC110488805 LOC106605152 coding downstream 6712 36217020 ~ 36227769 (+)
LOC101268898 NA coding downstream 19207 36229498 ~ 36233187 (+)
LOC118936744 LOC106605183 coding downstream 65433 36275741 ~ 36278586 (+)
LOC110488849 LOC106605147 coding downstream 144575 36354883 ~ 36405310 (+)
LOC110488866 LOC106582899 coding downstream 210443 36420751 ~ 36656060 (+)
G137245 LOC106605149 non-coding upstream 2281 36202488 ~ 36207731 (+)
G137240 NA non-coding upstream 12435 36197348 ~ 36197577 (+)
G137236 NA non-coding upstream 13495 36196053 ~ 36196517 (+)
G137234 LOC106582818 non-coding upstream 17329 36189266 ~ 36192683 (+)
G137239 NA non-coding upstream 21248 36188035 ~ 36188764 (+)
G137249 NA non-coding downstream 3170 36213478 ~ 36213816 (+)
G137250 NA non-coding downstream 4211 36214519 ~ 36214830 (+)
G137256 NA non-coding downstream 33296 36243604 ~ 36248682 (+)
G137257 NA non-coding downstream 41034 36251342 ~ 36252734 (+)
G137058 LOC106605156 other upstream 109735 36099611 ~ 36100277 (+)
G136994 NA other upstream 172271 35982832 ~ 36037741 (+)
LOC110488639 LOC106605005 other upstream 422542 35785691 ~ 35788114 (+)
LOC110488391 LOC106582385 other upstream 1026016 35180650 ~ 35184002 (+)
G139004 NA other downstream 1566753 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1709427 37919735 ~ 37940714 (+)
G139101 NA other downstream 1733434 37943742 ~ 37944012 (+)
G139179 NA other downstream 1841051 38051359 ~ 38051744 (+)

Expression


Co-expression Network