G137280


Basic Information

Item Value
gene id G137280
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36270937 ~ 36271182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU158028
ctgggttttaggctgggtttctgtacaacacattgatatatcagctgatgtaagaagggctatagaaatatatttgatttgattcaggggcagaacgacagatttttacctcgtcagctcgggtattcgatccaccaacctttcagttactggcccaacgctctaaccactaggcaacctgccaccccttatgactggtactgtatatacacacattgtATATCGTTCCAAAATGCCATCCTGGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158028 True 246 lncRNA 0.42 1 36270937 36271182

Neighbor

gene id symbol gene type direction distance location
LOC101268898 NA coding upstream 37775 36229498 ~ 36233187 (+)
LOC110488805 LOC106605152 coding upstream 43168 36217020 ~ 36227769 (+)
LOC110533753 LOC106605184 coding upstream 148687 36118066 ~ 36123229 (+)
LOC110488747 LOC106605155 coding upstream 157815 36109289 ~ 36113122 (+)
iglon5 iglon5 coding upstream 201525 35928900 ~ 36069412 (+)
LOC118936744 LOC106605183 coding downstream 4559 36275741 ~ 36278586 (+)
LOC110488849 LOC106605147 coding downstream 83701 36354883 ~ 36405310 (+)
LOC110488866 LOC106582899 coding downstream 149569 36420751 ~ 36656060 (+)
LOC110488878 LOC106561205 coding downstream 440902 36712084 ~ 36715233 (+)
LOC110488885 LOC106605145 coding downstream 449966 36721148 ~ 36732138 (+)
G137275 NA non-coding upstream 4109 36266568 ~ 36266828 (+)
G137274 NA non-coding upstream 5063 36265628 ~ 36265874 (+)
G137266 NA non-coding upstream 13841 36256892 ~ 36257096 (+)
G137265 NA non-coding upstream 15491 36255260 ~ 36255446 (+)
G137257 NA non-coding upstream 18203 36251342 ~ 36252734 (+)
G137298 LOC106605148 non-coding downstream 26938 36298120 ~ 36300071 (+)
G137433 NA non-coding downstream 92890 36364072 ~ 36364287 (+)
G137446 NA non-coding downstream 118345 36389527 ~ 36389806 (+)
G137447 NA non-coding downstream 119941 36391123 ~ 36391888 (+)
G137415 NA non-coding downstream 143556 36414738 ~ 36415241 (+)
G137058 LOC106605156 other upstream 170660 36099611 ~ 36100277 (+)
G136994 NA other upstream 233196 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 414537 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 483467 35785691 ~ 35788114 (+)
LOC110488391 LOC106582385 other upstream 1086941 35180650 ~ 35184002 (+)
G139004 NA other downstream 1505879 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1648553 37919735 ~ 37940714 (+)
G139101 NA other downstream 1672560 37943742 ~ 37944012 (+)
G139179 NA other downstream 1780177 38051359 ~ 38051744 (+)

Expression


Co-expression Network