G137298 (LOC106605148)


Basic Information

Item Value
gene id G137298
gene name LOC106605148
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36298120 ~ 36300071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU158046
TTTTGGGGCACTATGCTACTTACAGAGAGAAAACACCATGGCTCTAAAAGGGGTTTGGTTGTTGATTTATTACATAGCCTATCATGTGACCCTCCTCAGGTCCTATATTACTCCACCCAATGACTGTCTCTCCGTGTCACATTCTAACCCGTACATACCACCCGCAGAACTTCAGTGAATTTTTCAGAGGTATCCCTGGGAGAACTCTGATCAAGGTGACGTTTTCATTTCGATAAAAAGGGGCATCACTGACAGATTGATGAAGTGAGGCAGGATCTACAGCTATTAAAAaggtagaggggggagagagggagttctCACCCCCTTACCGTCCTCCCCCAGGCCTAGGGTCTCCTGCGGGGGAGAACCAGATGACCATTGGCCCCAGAGGGGAAAGGAACCCCAACCCCCAAACCAGAGGGAGTCTGGGGGACTCTGTAAACGTCAGCTCTGAGAAGGTGACACCCTCAAATATTTGGCAACCTGATAGCTCATGGTCCCTTACACTTTGTAGCACTTTCTACTATGGTGAAATATGTTACATGACAACAGCAACAAAATAAATCTGTGTTTGTGAGGAATTTAAAATGCCCttttaagttaatattttgtggTAGCGAAGTAAAAAGTCACTTTTTTTCCACAAGGAATTGACCAGTTATCCAGTAAAAATAACTTAGCACACTTTAATTTCTATCCTGCATTGGCAACAAGGTAGCTTACACAGTAGCAACAGATAAAAAGGCAATGCAGAGTTCGCTGCCAGCCAGTTACACAGCTGTAGCTGTCAAAATCAATCACAATTGCGTCACAACTAACGTATCAGTGGTCAGTAGTTGCTGTGTAAGAGTTAGCGCTCTTTGGGGTAAGGTTCAGAGGTGCTGTAGGATCAAAATAACCGACCCTGCATCCCTCCTTGTCTAATACGACTGTCGCGGTAGTACTGTCTCTAGAGTATTATGCTCAGTGTTTAATTGGAGGGGAGTCTCCTATAaagctgtttctctttctctctctctctcactcgtttcctctctctctcactcatttcctccctctctctctcactcgtttcctctctctctctcactcgtttcctctctctctctcactcatttcctccctctctcacttttcGTCCAGTTCAGTGCATTAACGACCCCACAGGGGCCCTCGCGTGTTTGTTCCAACGCCCGcgtttaagaaaaaaaaaagaggcaCCACACAAACTAAACTGGCACAGTTCGGAATGAGGTACTCACGGTTCACTCCAGTTTAGAAAAAAACTCTTGTGGTTTTCCATTCTAAATTATGAATTTGTTCGAGAGAAGAGTGTAGGGTTGTAAATACAGCCTCATCTGTGCCTGTTGTTTTCTCACTGATGCGCCTTATTGTGTGTTGTAGAGTCAGAGCGGAGCTTAGGGGAGGCTGTCAGTCACTATAGATCTGACAATACCTATTGGTTAGGATAGGGAGTGGGCGGGACAGCCATATCCAACACAACcgcacacactcactgacactaACATCTTCAGGGGTAAATGATTCCACTCGAAAATAAGGTGTAGCCCATCCACACCCCTCACTTTCCATAGGACCTATAAATACAGCATATCAACCTGGGAGAAGACTAAGGATTACGGCACAATAACAAAGTCTTCTTTTAGAGAAGTGGTGTCAAACAGTGGACTCTTTGGGCCCCTCCTGTGCTGCGTTCTTGCAGCTGTAGAGCCACTTGATGACACGGGCATTCCTCTCGATGATTGACACCCCCGTGGTCAGCTTCTCGGCCACCTCCTCCTGGAAAAGCCCCGCCTCTCCTGAGTGGCGGGAGAACTCGCTGGGCTCCGAGCCACCGCACCCTCCCCCTATGCTCCTCAGCACCAATGAGAGCGTGTCTACGTCGCTGGCCCCACCCAGGAAGTTCTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158046 True 1929 lncRNA 0.47 2 36298120 36300071

Neighbor

gene id symbol gene type direction distance location
LOC118936744 LOC106605183 coding upstream 19534 36275741 ~ 36278586 (+)
LOC101268898 NA coding upstream 64958 36229498 ~ 36233187 (+)
LOC110488805 LOC106605152 coding upstream 70351 36217020 ~ 36227769 (+)
LOC110533753 LOC106605184 coding upstream 175870 36118066 ~ 36123229 (+)
LOC110488747 LOC106605155 coding upstream 184998 36109289 ~ 36113122 (+)
LOC110488849 LOC106605147 coding downstream 54812 36354883 ~ 36405310 (+)
LOC110488866 LOC106582899 coding downstream 120680 36420751 ~ 36656060 (+)
LOC110488878 LOC106561205 coding downstream 412013 36712084 ~ 36715233 (+)
LOC110488885 LOC106605145 coding downstream 421077 36721148 ~ 36732138 (+)
LOC110533757 NA coding downstream 445010 36745080 ~ 36747247 (+)
G137280 NA non-coding upstream 26938 36270937 ~ 36271182 (+)
G137275 NA non-coding upstream 31292 36266568 ~ 36266828 (+)
G137274 NA non-coding upstream 32246 36265628 ~ 36265874 (+)
G137266 NA non-coding upstream 41024 36256892 ~ 36257096 (+)
G137265 NA non-coding upstream 42674 36255260 ~ 36255446 (+)
G137433 NA non-coding downstream 64001 36364072 ~ 36364287 (+)
G137446 NA non-coding downstream 89456 36389527 ~ 36389806 (+)
G137447 NA non-coding downstream 91052 36391123 ~ 36391888 (+)
G137415 NA non-coding downstream 114667 36414738 ~ 36415241 (+)
G137550 NA non-coding downstream 193669 36493740 ~ 36503970 (+)
G137058 LOC106605156 other upstream 197843 36099611 ~ 36100277 (+)
G136994 NA other upstream 260379 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 441720 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 510650 35785691 ~ 35788114 (+)
LOC110488391 LOC106582385 other upstream 1114124 35180650 ~ 35184002 (+)
G139004 NA other downstream 1476990 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1619664 37919735 ~ 37940714 (+)
G139101 NA other downstream 1643671 37943742 ~ 37944012 (+)
G139179 NA other downstream 1751288 38051359 ~ 38051744 (+)

Expression


Co-expression Network