G138100



Basic Information


Item Value
gene id G138100
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36792396 ~ 36881614 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU158892
ggtcaatcttccaatgatatgcctacaaatacgtcacaatgctgctaagaccttgggcgaacgacagaaagtgtaggctcattcgttgcacaatcacagccatataaggagagaatggaaaacagagcttcagaaattctgctaattcctgggtgatgcatcatcttggtttcgcctgtagaatgagttctggggcacttacagacaaaatctttgcagattctgaaacttcagagtgttttctttccaaaactgtcaagaatatgcatagtcgagcatctttttgtgacaaaatatcgcgcttaaaacgggaacgttttttatccaaaaatgaaatagcgcccctagagctctaacaggttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagccccctta

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU158892 True 413 lncRNA 0.40 2 36792396 36881614

Neighbor


gene id symbol gene type direction distance location
LOC118939565 NA coding downstream 251198 36487954 ~ 36541198 (-)
LOC110488840 LOC106605148 coding downstream 436606 36299063 ~ 36355790 (-)
LOC110488753 LOC106582818 coding downstream 576034 36189587 ~ 36216362 (-)
LOC110488787 LOC106605151 coding downstream 603448 36143887 ~ 36188948 (-)
LOC110534917 NA coding downstream 659077 36123282 ~ 36133319 (-)
LOC110488943 LOC106582967 coding upstream 40488 36922102 ~ 36925882 (-)
LOC110533765 NA coding upstream 382562 37264176 ~ 37272975 (-)
LOC110488968 LOC106605134 coding upstream 451033 37332647 ~ 37337607 (-)
LOC110501508 LOC106605132 coding upstream 560745 37442359 ~ 37463839 (-)
LOC118939571 NA coding upstream 582371 37463985 ~ 37476762 (-)
G138099 NA non-coding downstream 1873 36790286 ~ 36790523 (-)
G138096 NA non-coding downstream 7495 36784597 ~ 36784901 (-)
G138078 NA non-coding downstream 32985 36759199 ~ 36759411 (-)
G138074 NA non-coding downstream 36357 36755824 ~ 36756039 (-)
G137889 NA non-coding downstream 286489 36494077 ~ 36505907 (-)
G138146 NA non-coding upstream 16278 36897892 ~ 36899091 (-)
G138167 NA non-coding upstream 35973 36917587 ~ 36918192 (-)
G138153 NA non-coding upstream 61651 36943265 ~ 36946080 (-)
G138181 NA non-coding upstream 83686 36965300 ~ 36965528 (-)
G137839 LOC106605146 other downstream 153391 36634193 ~ 36639005 (-)
G137479 NA other downstream 422068 36370004 ~ 36370328 (-)
drd2l LOC106582624 other downstream 1116691 35674291 ~ 35700846 (-)
G136399 psmc4 other downstream 1484667 35306367 ~ 35307729 (-)
G135575 NA other downstream 2187918 34604215 ~ 34604478 (-)
G139231 NA other upstream 865827 37747441 ~ 37752958 (-)
LOC110489105 LOC106605178 other upstream 1165088 38046700 ~ 38048666 (-)
G140479 NA other upstream 1946295 38827909 ~ 38828195 (-)
G140879 NA other upstream 2182248 39063862 ~ 39064418 (-)

Expression



Co-expression Network