Gene
RNA
| Item | Value |
|---|---|
| gene id | G138145 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 36870035 ~ 36874281 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tc1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU158937 | True | 654 | lncRNA | 0.42 | 3 | 36870035 | 36874281 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pnrc2 | LOC106605140 | coding | downstream | 20662 | 36844929 ~ 36849373 (-) |
| LOC118939565 | NA | coding | downstream | 328837 | 36487954 ~ 36541198 (-) |
| LOC110488840 | LOC106605148 | coding | downstream | 514245 | 36299063 ~ 36355790 (-) |
| LOC110488753 | LOC106582818 | coding | downstream | 653673 | 36189587 ~ 36216362 (-) |
| LOC110488787 | LOC106605151 | coding | downstream | 681087 | 36143887 ~ 36188948 (-) |
| LOC110488943 | LOC106582967 | coding | upstream | 47821 | 36922102 ~ 36925882 (-) |
| LOC110533765 | NA | coding | upstream | 389895 | 37264176 ~ 37272975 (-) |
| LOC110488968 | LOC106605134 | coding | upstream | 458366 | 37332647 ~ 37337607 (-) |
| LOC110501508 | LOC106605132 | coding | upstream | 568078 | 37442359 ~ 37463839 (-) |
| LOC118939571 | NA | coding | upstream | 589704 | 37463985 ~ 37476762 (-) |
| G138080 | NA | non-coding | downstream | 41638 | 36825792 ~ 36828397 (-) |
| G138099 | NA | non-coding | downstream | 79512 | 36790286 ~ 36790523 (-) |
| G138096 | NA | non-coding | downstream | 85134 | 36784597 ~ 36784901 (-) |
| G138078 | NA | non-coding | downstream | 110624 | 36759199 ~ 36759411 (-) |
| G138074 | NA | non-coding | downstream | 113996 | 36755824 ~ 36756039 (-) |
| G138146 | NA | non-coding | upstream | 23611 | 36897892 ~ 36899091 (-) |
| G138167 | NA | non-coding | upstream | 43306 | 36917587 ~ 36918192 (-) |
| G138153 | NA | non-coding | upstream | 68984 | 36943265 ~ 36946080 (-) |
| G138181 | NA | non-coding | upstream | 91019 | 36965300 ~ 36965528 (-) |
| G137839 | LOC106605146 | other | downstream | 231030 | 36634193 ~ 36639005 (-) |
| G137479 | NA | other | downstream | 499707 | 36370004 ~ 36370328 (-) |
| drd2l | LOC106582624 | other | downstream | 1194330 | 35674291 ~ 35700846 (-) |
| G139231 | NA | other | upstream | 873160 | 37747441 ~ 37752958 (-) |
| LOC110489105 | LOC106605178 | other | upstream | 1172421 | 38046700 ~ 38048666 (-) |
| G140479 | NA | other | upstream | 1953628 | 38827909 ~ 38828195 (-) |
| G140879 | NA | other | upstream | 2189581 | 39063862 ~ 39064418 (-) |
