G138153


Basic Information

Item Value
gene id G138153
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36943265 ~ 36946080 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU158948
TATTTATTTCATGTGAATGATAAAACTTTTGGCAGAACTGACAACAGTGGATTTACTATAGTCCCAAATGTCTACTATTTGCAAAAAtcaaatgaacaaaacaaacacaggCAAAAAAAACAACCTTTCTTGCATTCAGGGCAGAATAATGCAATTTGGTCATTTTTTCCCAGGATTCATTTTCATGGTTAGACCTGGTCTCTCTTACCCACAGTGAAATACAATGAGCAATGTTATGTTGAGAATCATTTAGCTTGACGACACGTTGTTGCATACATGCTTGGAATGGGTTTTCATATCGGCTTCATGctgcgtttctttttttttttcgtgTGGATTGCTGTGATAAAACTGACAAAGTCCTTGAGCAGAACCCTCAGCTAAAGTGAAACCTTCATAAAGTTCCAACAAATTTGTAAGTCAAGATGATAGATAACAGCACAAAGATCAAATTCTAAATCCaccagtgttgtgttgtatggtacAGAGTGTTGGAAAGTGACTGACCAGAATAAACAATTCACCTTACACGCAACTTGTCTGCGAAGAATACTCCACATCTGTTGGCCTAATGCATTAAACGCCAACCTCCTCAGACAAACAAGCAAATGCTGATCAACATCAGCAAAGCTAAAGCACAATGGAGAAGATTTCCAAAGTGCCAGAAGTGGAAAGCCGTTGTTGCTGTCCTATATGCGTCAGACGGCGCgatttaaaaacaaatgtttttaatTGTACCATTATTTAACTTTGcatgtcaattaagaacaaattcttattttcaatgacggcctaggaacagtgggttaactgccttgttcaggggcagaacgacagatttttaccatgtcagctcggggattcgatcttgcaacctttgttactagcccaacgctctaaccactaggctacctgccgcccctgtgcGATGGGGGATGAGTGAATTAAACAACTAGTCACGTAAGGCAGGGTTTGAAGTGGTGACTGGCATTTCATTGCCACCATTCTGTTTATCATGATCATAACCATCATTAAATGATATAATGTCAATTGGTGCCACACAACCGGAATGTATAGGTCCCATCAGAGACCTTTCCTAGTTAGGCTGGTCCGTGATCTGTTTGTGCCGTCTTGCCAACTCTTTTATTCATTGTCACGCCTTGGCAAGaccgcacaaacagatctgggaccagattaGCTCATTCCTAATGGCATCGGACTCCACCTGCTTCAGTAAAGAGAAGGGTCATGCTCAAAGAACTTGTGATGTCATAAATGTATGAGTTGCACACATTAGTTGAAGATTGGTATAGTTGGTTGGCTGTTAGTAGCATTTGGTCTATGGCAAGCATCCATGCGGGGCAGTATTACGATTGAGTGTCAGAAGATATGGCTAAACTGACTACTTTATGCACAAGGGAGATATATATATCTAGAATGTGCTTGTACTGCATACATCATTTGATAGCCAAACCAAGAGAATAAGCCAATGCAATGGACTATTTTCAGAAGACAAAATATAGAATGTTTTGTCTGTGCAAGATTCTAATGAATCAGATATCCAACTGCAACAAATCCTAGTTAGAATCTATAATGTTGTTTCAGAATCTATAAGCATCACTGATCAAACCGCTGGTAACAGGTTTATTCTTTAGCGCAATTTTCCAACATGGCATAGCATTATACAGTATGACACTACAGCAACTTTGAGCATAGGGCCTGCACTGGCAAATCAACATGGGGCAGTCATGAATCCATAATCCCCAACTATCCTCttttccagacacacacacacacacacacgaacaaaaGCAGAAAAAGTGGACACTACAATCCCTTTTGCACTCTGAGGAACCCTGTTTTCTTCAGAATGAATGAAACCAGAAGCAAAGTCTTGGGCAGCATACAGGCGGGTGAGTAGTGATTGAGCTTGCCTGCTGCAAGCTTTCTATCTAAATAAGGCCTTGAGAAAGTGTTACCATGTGCGTTTTGGATAAACACCAAGCATTTCTTAGAGACTTCGACCCATAAGTATGCACAGGGTTACACAACTATACTGATCCCCGTTACAGCCTATGCAGTTTCTTCTCCTTATCGAGGGTTACATCaacgtttacattttttttttaaaagtactTCTTCACATGGATGAACCAGCAGCTAAAACAGACAACGATATTACCAAGCTTCCTCAGGTCTCTTGGGACTTGAAGCACGTCAAGCCTCTCTCACTGAAAGTTCCCAAATGCCAAATACGATTTTGCTTACGTATACCAGTCCTGTTGGACTTTCATTTAGCTGTTTTTACTCGTGGCAAAGAGTGCCAAACAGCGGAAAACAATGCCTTGCATTCACACGAAATGTACGAATGTTCCTAGTTTCTCTGCATTCAGTTTCCCTTTCATCCTAGCTTTGTAAGCTCGCAGTCCTCCTTACCCTCTGAGCTTCGGGTTCAGCCCTGACTCTTCATTTGAATTTTTAGCTCTAGTCCTCTTCCTGTGATTTTTAGGATCTGGGTGCGAGAGTTATGATTGGTTTACTGAAAACCCCAATCCATTAGTCTTTTCCGCACGATCCCTCCCCATCTTTCTTTTCtatctttctgtcctttcctatcctctctctccgtctgtctatTTGTGTTTAGACAGTGCTCCGGGGCGTGCCGTTGAGTGTCACAGCCTTGGTGCAGGGCGTGCCGGCCGCCTGGGAGCCCGTCCACGGTGTGGAAACACCCACCTCAAACACCTCGTGGATGGCCTTCCGGAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158948 True 2770 lncRNA 0.35 2 36943265 36946080

Neighbor

gene id symbol gene type direction distance location
LOC110488943 LOC106582967 coding downstream 17383 36922102 ~ 36925882 (-)
pnrc2 LOC106605140 coding downstream 93892 36844929 ~ 36849373 (-)
LOC118939565 NA coding downstream 402067 36487954 ~ 36541198 (-)
LOC110488840 LOC106605148 coding downstream 587475 36299063 ~ 36355790 (-)
LOC110488753 LOC106582818 coding downstream 726903 36189587 ~ 36216362 (-)
LOC110533765 NA coding upstream 318096 37264176 ~ 37272975 (-)
LOC110488968 LOC106605134 coding upstream 386567 37332647 ~ 37337607 (-)
LOC110501508 LOC106605132 coding upstream 496279 37442359 ~ 37463839 (-)
LOC118939571 NA coding upstream 517905 37463985 ~ 37476762 (-)
LOC110489008 LOC106604987 coding upstream 831324 37777404 ~ 37782182 (-)
G138167 NA non-coding downstream 25073 36917587 ~ 36918192 (-)
G138146 NA non-coding downstream 44174 36897892 ~ 36899091 (-)
G138100 NA non-coding downstream 61651 36792396 ~ 36881614 (-)
G138181 NA non-coding upstream 19220 36965300 ~ 36965528 (-)
G138188 NA non-coding upstream 27763 36973843 ~ 36974112 (-)
G138199 NA non-coding upstream 56520 37002600 ~ 37003045 (-)
G138243 NA non-coding upstream 122513 37068593 ~ 37068833 (-)
G138260 NA non-coding upstream 132506 37078586 ~ 37078895 (-)
G138080 NA other downstream 114868 36825792 ~ 36828397 (-)
G137839 LOC106605146 other downstream 304260 36634193 ~ 36639005 (-)
G137479 NA other downstream 572937 36370004 ~ 36370328 (-)
drd2l LOC106582624 other downstream 1267560 35674291 ~ 35700846 (-)
G139231 NA other upstream 801361 37747441 ~ 37752958 (-)
LOC110489105 LOC106605178 other upstream 1100622 38046700 ~ 38048666 (-)
G140479 NA other upstream 1881829 38827909 ~ 38828195 (-)
G140879 NA other upstream 2117782 39063862 ~ 39064418 (-)

Expression


Co-expression Network