G138343


Basic Information

Item Value
gene id G138343
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37157915 ~ 37158305 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU159139
gtgtaacggttttctaggtgtgaaggagagtcggaccaaaatgcggcgtgtagattgcgatccatgtttattgtgactatagcaacacgaatctaaatacaaacagtgcaaaataataaatgtaatgaaaaccgaaaacagcctaaactggtgcaaactaacactaaggacaatcacccacaaacacacagtgaaacccaggctacctaaatatggttcccaatcagagacaatgactaacacctgcctctgattgagaaccatatcaggccggacatagaaatagacaaacaagacatccaacatagaatgcccacccagttcacgtcctgaccaacactaaaacaaggaaaacacacacgaacgatggtcagaacgtgacagtaccccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159139 True 391 lncRNA 0.43 1 37157915 37158305

Neighbor

gene id symbol gene type direction distance location
LOC110488952 LOC106605136 coding upstream 211821 36927068 ~ 36946094 (+)
LOC110488936 LOC106605137 coding upstream 235657 36919644 ~ 36922258 (+)
LOC110488922 LOC106605138 coding upstream 242306 36907263 ~ 36915609 (+)
LOC100499584 LOC100379100 coding upstream 259163 36874482 ~ 36898752 (+)
cnr2 LOC106605139 coding upstream 287631 36859708 ~ 36870284 (+)
LOC110488961 LOC106605135 coding downstream 116017 37274322 ~ 37278025 (+)
LOC110488976 LOC106605133 coding downstream 189351 37347656 ~ 37396662 (+)
gnl2 nog2 coding downstream 414099 37572404 ~ 37603294 (+)
LOC110488991 LOC106605131 coding downstream 448788 37607093 ~ 37621875 (+)
LOC110489000 LOC106605130 coding downstream 469847 37628152 ~ 37664293 (+)
G138340 NA non-coding upstream 2835 37154867 ~ 37155080 (+)
G138263 NA non-coding upstream 77103 37080585 ~ 37080812 (+)
G138244 NA non-coding upstream 88708 37068938 ~ 37069207 (+)
G137791 NA non-coding upstream 182317 36975393 ~ 36975598 (+)
G137787 NA non-coding upstream 189295 36968179 ~ 36968620 (+)
G138350 NA non-coding downstream 6217 37164522 ~ 37164787 (+)
G138367 NA non-coding downstream 27843 37186148 ~ 37186398 (+)
G138503 NA non-coding downstream 147142 37305447 ~ 37305679 (+)
G138515 NA non-coding downstream 165379 37323684 ~ 37323896 (+)
G138501 LOC106605134 non-coding downstream 177774 37336079 ~ 37337074 (+)
LOC110488849 LOC106605147 other upstream 755944 36354883 ~ 36405310 (+)
G137058 LOC106605156 other upstream 1057638 36099611 ~ 36100277 (+)
G136994 NA other upstream 1120174 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 1301515 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 1370445 35785691 ~ 35788114 (+)
G139004 NA other downstream 618756 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 761430 37919735 ~ 37940714 (+)
G139101 NA other downstream 785437 37943742 ~ 37944012 (+)
G139179 NA other downstream 893054 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 4380990 41539240 ~ 41541654 (+)

Expression


Co-expression Network