G138515


Basic Information

Item Value
gene id G138515
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37323684 ~ 37323896 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU159325
atattaaggatatggtgtccatattaagactatgttgagttgtgttaaggctatggtgtccatattaaggctatggtgtccatattaaggatatggtgtccatattaagactatgttgagttgtgttaaggctatggtgtccatattaagactatgttgagttgtgttaaggctatggtgtccatattaagactatgttgagttgtgttaagg

Function

NR:

description
PREDICTED: thioredoxin domain-containing protein 12

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159325 True 213 lncRNA 0.48 1 37323684 37323896

Neighbor

gene id symbol gene type direction distance location
LOC110488961 LOC106605135 coding upstream 45659 37274322 ~ 37278025 (+)
LOC110488952 LOC106605136 coding upstream 377590 36927068 ~ 36946094 (+)
LOC110488936 LOC106605137 coding upstream 401426 36919644 ~ 36922258 (+)
LOC110488922 LOC106605138 coding upstream 408075 36907263 ~ 36915609 (+)
LOC100499584 LOC100379100 coding upstream 424932 36874482 ~ 36898752 (+)
LOC110488976 LOC106605133 coding downstream 23760 37347656 ~ 37396662 (+)
gnl2 nog2 coding downstream 248508 37572404 ~ 37603294 (+)
LOC110488991 LOC106605131 coding downstream 283197 37607093 ~ 37621875 (+)
LOC110489000 LOC106605130 coding downstream 304256 37628152 ~ 37664293 (+)
LOC110501519 LOC106605129 coding downstream 375319 37699215 ~ 37763715 (+)
G138503 NA non-coding upstream 18005 37305447 ~ 37305679 (+)
G138367 NA non-coding upstream 137286 37186148 ~ 37186398 (+)
G138350 NA non-coding upstream 158897 37164522 ~ 37164787 (+)
G138343 NA non-coding upstream 165379 37157915 ~ 37158305 (+)
G138340 NA non-coding upstream 168604 37154867 ~ 37155080 (+)
G138501 LOC106605134 non-coding downstream 12183 37336079 ~ 37337074 (+)
G138522 NA non-coding downstream 17060 37340956 ~ 37341211 (+)
G138558 NA non-coding downstream 76911 37400807 ~ 37401048 (+)
G138566 NA non-coding downstream 84073 37407969 ~ 37408189 (+)
G138569 NA non-coding downstream 87009 37410905 ~ 37466211 (+)
LOC110488849 LOC106605147 other upstream 921713 36354883 ~ 36405310 (+)
G137058 LOC106605156 other upstream 1223407 36099611 ~ 36100277 (+)
G136994 NA other upstream 1285943 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 1467284 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 1536214 35785691 ~ 35788114 (+)
G139004 NA other downstream 453165 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 595839 37919735 ~ 37940714 (+)
G139101 NA other downstream 619846 37943742 ~ 37944012 (+)
G139179 NA other downstream 727463 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 4215399 41539240 ~ 41541654 (+)

Expression


Co-expression Network