G138558


Basic Information

Item Value
gene id G138558
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37400807 ~ 37401048 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU159368
cagcaaggaagaagccactgctccaaaaccgccataaaaaggaaaggaggaaaggaggcctacaaacctgactcagttacaccagctctgtcaggaggaatgggccgaaattcaccaaacttattgtgggaagcttgtggaaggctacccaaaacgtttgacccaagttaaacaatttaaaggcaatgataccaaatactaattgagtgtatgtaaacttctgatccactgggaatgcgatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159368 True 242 lncRNA 0.44 1 37400807 37401048

Neighbor

gene id symbol gene type direction distance location
LOC110488976 LOC106605133 coding upstream 4145 37347656 ~ 37396662 (+)
LOC110488961 LOC106605135 coding upstream 122782 37274322 ~ 37278025 (+)
LOC110488952 LOC106605136 coding upstream 454713 36927068 ~ 36946094 (+)
LOC110488936 LOC106605137 coding upstream 478549 36919644 ~ 36922258 (+)
LOC110488922 LOC106605138 coding upstream 485198 36907263 ~ 36915609 (+)
gnl2 nog2 coding downstream 171356 37572404 ~ 37603294 (+)
LOC110488991 LOC106605131 coding downstream 206045 37607093 ~ 37621875 (+)
LOC110489000 LOC106605130 coding downstream 227104 37628152 ~ 37664293 (+)
LOC110501519 LOC106605129 coding downstream 298167 37699215 ~ 37763715 (+)
LOC110489035 LOC106605126 coding downstream 462153 37863201 ~ 37890510 (+)
G138522 NA non-coding upstream 59596 37340956 ~ 37341211 (+)
G138501 LOC106605134 non-coding upstream 63733 37336079 ~ 37337074 (+)
G138515 NA non-coding upstream 76911 37323684 ~ 37323896 (+)
G138503 NA non-coding upstream 95128 37305447 ~ 37305679 (+)
G138367 NA non-coding upstream 214409 37186148 ~ 37186398 (+)
G138566 NA non-coding downstream 6921 37407969 ~ 37408189 (+)
G138569 NA non-coding downstream 9857 37410905 ~ 37466211 (+)
G138621 NA non-coding downstream 96360 37497408 ~ 37497640 (+)
G138622 NA non-coding downstream 97570 37498618 ~ 37498959 (+)
G138630 NA non-coding downstream 111491 37512539 ~ 37512745 (+)
LOC110488849 LOC106605147 other upstream 998836 36354883 ~ 36405310 (+)
G137058 LOC106605156 other upstream 1300530 36099611 ~ 36100277 (+)
G136994 NA other upstream 1363066 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 1544407 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 1613337 35785691 ~ 35788114 (+)
G139004 NA other downstream 376013 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 518687 37919735 ~ 37940714 (+)
G139101 NA other downstream 542694 37943742 ~ 37944012 (+)
G139179 NA other downstream 650311 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 4138247 41539240 ~ 41541654 (+)

Expression


Co-expression Network