G138566


Basic Information

Item Value
gene id G138566
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37407969 ~ 37408189 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU159376
cttcttaacctcctgccaaatgtatgaccttaTTTGAGGATATTTCCCCCATATATTTCCCTCATATTACACAgacacaaagaatttgaaaacacacccaatgttgataaactcccatatctattgggtgaaataccacggtgtgccaccacagcagcaagatttttgacctgttgtcacaagaaaatggcaaccagAGAATAACAAAACacatatttatg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159376 True 221 lncRNA 0.38 1 37407969 37408189

Neighbor

gene id symbol gene type direction distance location
LOC110488976 LOC106605133 coding upstream 11307 37347656 ~ 37396662 (+)
LOC110488961 LOC106605135 coding upstream 129944 37274322 ~ 37278025 (+)
LOC110488952 LOC106605136 coding upstream 461875 36927068 ~ 36946094 (+)
LOC110488936 LOC106605137 coding upstream 485711 36919644 ~ 36922258 (+)
LOC110488922 LOC106605138 coding upstream 492360 36907263 ~ 36915609 (+)
gnl2 nog2 coding downstream 164215 37572404 ~ 37603294 (+)
LOC110488991 LOC106605131 coding downstream 198904 37607093 ~ 37621875 (+)
LOC110489000 LOC106605130 coding downstream 219963 37628152 ~ 37664293 (+)
LOC110501519 LOC106605129 coding downstream 291026 37699215 ~ 37763715 (+)
LOC110489035 LOC106605126 coding downstream 455012 37863201 ~ 37890510 (+)
G138558 NA non-coding upstream 6921 37400807 ~ 37401048 (+)
G138522 NA non-coding upstream 66758 37340956 ~ 37341211 (+)
G138501 LOC106605134 non-coding upstream 70895 37336079 ~ 37337074 (+)
G138515 NA non-coding upstream 84073 37323684 ~ 37323896 (+)
G138503 NA non-coding upstream 102290 37305447 ~ 37305679 (+)
G138569 NA non-coding downstream 2716 37410905 ~ 37466211 (+)
G138621 NA non-coding downstream 89219 37497408 ~ 37497640 (+)
G138622 NA non-coding downstream 90429 37498618 ~ 37498959 (+)
G138630 NA non-coding downstream 104350 37512539 ~ 37512745 (+)
G138631 NA non-coding downstream 110305 37518494 ~ 37518854 (+)
LOC110488849 LOC106605147 other upstream 1005998 36354883 ~ 36405310 (+)
G137058 LOC106605156 other upstream 1307692 36099611 ~ 36100277 (+)
G136994 NA other upstream 1370228 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 1551569 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 1620499 35785691 ~ 35788114 (+)
G139004 NA other downstream 368872 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 511546 37919735 ~ 37940714 (+)
G139101 NA other downstream 535553 37943742 ~ 37944012 (+)
G139179 NA other downstream 643170 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 4131106 41539240 ~ 41541654 (+)

Expression


Co-expression Network