G138622


Basic Information

Item Value
gene id G138622
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37498618 ~ 37498959 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU159435
cagagatacaacctctctcatcatcacccagtgcctgggcttacctccgctgtacccgcaccccaccatacccctgtctgcgcattatgccctgaatatattctaccatgcccagaaacctgctcctcttattctctgtccccaacgctctaggcgaccagttttgatagcctttagccgcactctcatactactccttctctgttctgcgggtgatgtggaggtaaacccaggccctgcatgtccccaggcaccctcatttgttgacttctgtgatcgaaaaagccttggtttcatgcatgtcaacatcagaagcctcctccctaagtttgttttactcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159435 True 342 lncRNA 0.51 1 37498618 37498959

Neighbor

gene id symbol gene type direction distance location
LOC110488976 LOC106605133 coding upstream 101956 37347656 ~ 37396662 (+)
LOC110488961 LOC106605135 coding upstream 220593 37274322 ~ 37278025 (+)
LOC110488952 LOC106605136 coding upstream 552524 36927068 ~ 36946094 (+)
LOC110488936 LOC106605137 coding upstream 576360 36919644 ~ 36922258 (+)
LOC110488922 LOC106605138 coding upstream 583009 36907263 ~ 36915609 (+)
gnl2 nog2 coding downstream 73445 37572404 ~ 37603294 (+)
LOC110488991 LOC106605131 coding downstream 108134 37607093 ~ 37621875 (+)
LOC110489000 LOC106605130 coding downstream 129193 37628152 ~ 37664293 (+)
LOC110501519 LOC106605129 coding downstream 200256 37699215 ~ 37763715 (+)
LOC110489035 LOC106605126 coding downstream 364242 37863201 ~ 37890510 (+)
G138621 NA non-coding upstream 978 37497408 ~ 37497640 (+)
G138569 NA non-coding upstream 32407 37410905 ~ 37466211 (+)
G138566 NA non-coding upstream 90429 37407969 ~ 37408189 (+)
G138558 NA non-coding upstream 97570 37400807 ~ 37401048 (+)
G138522 NA non-coding upstream 157407 37340956 ~ 37341211 (+)
G138630 NA non-coding downstream 13580 37512539 ~ 37512745 (+)
G138631 NA non-coding downstream 19535 37518494 ~ 37518854 (+)
G138640 NA non-coding downstream 32460 37531419 ~ 37532113 (+)
G138805 NA non-coding downstream 36097 37535056 ~ 37590557 (+)
G138991 NA non-coding downstream 194023 37692982 ~ 37693181 (+)
LOC110488849 LOC106605147 other upstream 1096647 36354883 ~ 36405310 (+)
G137058 LOC106605156 other upstream 1398341 36099611 ~ 36100277 (+)
G136994 NA other upstream 1460877 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 1642218 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 1711148 35785691 ~ 35788114 (+)
G139004 NA other downstream 278102 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 420776 37919735 ~ 37940714 (+)
G139101 NA other downstream 444783 37943742 ~ 37944012 (+)
G139179 NA other downstream 552400 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 4040336 41539240 ~ 41541654 (+)

Expression


Co-expression Network