G138640


Basic Information

Item Value
gene id G138640
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37531419 ~ 37532113 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU159453
atccatgtgaaaGATGCAGACTCAGTCTCGACCTTTAAATCTtgactgaagactcatctcttcagtaggtcctatgattgagtgtagtctggcccaggggtgcgaaaGTGATCGGCAAGGCACTGGAACGaggaaccacccttgctgtctctgcttgggtggctcccctctctccacttggattctctgcctctgaccctattacgggggcttgctcttccatgtcgtccctaggaggtgtgcgtcacttgagtgggttgagtcacagacGGGATCCACCTGTTCAGTTTTACGCCTGAATCCTGACtgtattatttgaccctgctggtcatatatgaacgtttgaacatcttgaaggaCAATCTGGCTtttatggccatgtactcttataatctacacccggcacagccacaagactggccacccctcagagcctggttcctctctaggtttcttcctaggttccagcctttctagggagtttttcctagaccaccgtgcttctacatctgcactgcttgctgtttggggtttcaggctgggtttctgtatagcactttgtgacatctgctgatgtaaaaagggctttataaataaatgtgattgattgattgatacagagacataaaaacctgctccagagtgctcaggacctcgggataacaggataacgaccctaagcaaacagccaagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU159453 True 695 lncRNA 0.51 1 37531419 37532113

Neighbor

gene id symbol gene type direction distance location
LOC110488976 LOC106605133 coding upstream 134757 37347656 ~ 37396662 (+)
LOC110488961 LOC106605135 coding upstream 253394 37274322 ~ 37278025 (+)
LOC110488952 LOC106605136 coding upstream 585325 36927068 ~ 36946094 (+)
LOC110488936 LOC106605137 coding upstream 609161 36919644 ~ 36922258 (+)
LOC110488922 LOC106605138 coding upstream 615810 36907263 ~ 36915609 (+)
gnl2 nog2 coding downstream 40291 37572404 ~ 37603294 (+)
LOC110488991 LOC106605131 coding downstream 74980 37607093 ~ 37621875 (+)
LOC110489000 LOC106605130 coding downstream 96039 37628152 ~ 37664293 (+)
LOC110501519 LOC106605129 coding downstream 167102 37699215 ~ 37763715 (+)
LOC110489035 LOC106605126 coding downstream 331088 37863201 ~ 37890510 (+)
G138631 NA non-coding upstream 12565 37518494 ~ 37518854 (+)
G138630 NA non-coding upstream 18674 37512539 ~ 37512745 (+)
G138622 NA non-coding upstream 32460 37498618 ~ 37498959 (+)
G138621 NA non-coding upstream 33779 37497408 ~ 37497640 (+)
G138569 NA non-coding upstream 65208 37410905 ~ 37466211 (+)
G138805 NA non-coding downstream 2943 37535056 ~ 37590557 (+)
G138991 NA non-coding downstream 160869 37692982 ~ 37693181 (+)
G139038 LOC106586992 non-coding downstream 240877 37772990 ~ 37773504 (+)
G139040 NA non-coding downstream 244478 37776591 ~ 37776949 (+)
G139102 NA non-coding downstream 412789 37944902 ~ 37945164 (+)
LOC110488849 LOC106605147 other upstream 1129448 36354883 ~ 36405310 (+)
G137058 LOC106605156 other upstream 1431142 36099611 ~ 36100277 (+)
G136994 NA other upstream 1493678 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 1675019 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 1743949 35785691 ~ 35788114 (+)
G139004 NA other downstream 244948 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 387622 37919735 ~ 37940714 (+)
G139101 NA other downstream 411629 37943742 ~ 37944012 (+)
G139179 NA other downstream 519246 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 4007182 41539240 ~ 41541654 (+)

Expression


Co-expression Network