G138991


Basic Information

Item Value
gene id G138991
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37692982 ~ 37693181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU159831
tgagatgtgtttgttacttgaactctgaagcatttatttgggatgcaatttctgagcatggtaaactctaatgaacttatcctctgcagtagaggttactctgggtcttcctttcctgtgcggtcctcatgagagccagtttcatcatatcgcttgatggtttttaccaaatagggctatcttctgtatatcacttctac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159831 True 200 lncRNA 0.41 1 37692982 37693181

Neighbor

gene id symbol gene type direction distance location
LOC110489000 LOC106605130 coding upstream 28689 37628152 ~ 37664293 (+)
LOC110488991 LOC106605131 coding upstream 71107 37607093 ~ 37621875 (+)
gnl2 nog2 coding upstream 89688 37572404 ~ 37603294 (+)
LOC110488976 LOC106605133 coding upstream 296320 37347656 ~ 37396662 (+)
LOC110488961 LOC106605135 coding upstream 414957 37274322 ~ 37278025 (+)
LOC110501519 LOC106605129 coding downstream 6034 37699215 ~ 37763715 (+)
LOC110489035 LOC106605126 coding downstream 170020 37863201 ~ 37890510 (+)
sh3d21 LOC106605124 coding downstream 198770 37891951 ~ 37911330 (+)
LOC110489135 LOC106605117 coding downstream 1025111 38718292 ~ 38734398 (+)
LOC110489149 LOC106605176 coding downstream 1064052 38757233 ~ 38786447 (+)
G138805 NA non-coding upstream 102425 37535056 ~ 37590557 (+)
G138640 NA non-coding upstream 160869 37531419 ~ 37532113 (+)
G138631 NA non-coding upstream 174128 37518494 ~ 37518854 (+)
G138630 NA non-coding upstream 180237 37512539 ~ 37512745 (+)
G138622 NA non-coding upstream 194023 37498618 ~ 37498959 (+)
G139038 LOC106586992 non-coding downstream 79809 37772990 ~ 37773504 (+)
G139040 NA non-coding downstream 83410 37776591 ~ 37776949 (+)
G139102 NA non-coding downstream 251721 37944902 ~ 37945164 (+)
G139103 NA non-coding downstream 252163 37945344 ~ 37945605 (+)
G139139 LOC106605122 non-coding downstream 309885 38003066 ~ 38007585 (+)
LOC110488849 LOC106605147 other upstream 1291011 36354883 ~ 36405310 (+)
G137058 LOC106605156 other upstream 1592705 36099611 ~ 36100277 (+)
G136994 NA other upstream 1655241 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 1836582 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 1905512 35785691 ~ 35788114 (+)
G139004 NA other downstream 83880 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 226554 37919735 ~ 37940714 (+)
G139101 NA other downstream 250561 37943742 ~ 37944012 (+)
G139179 NA other downstream 358178 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 3846114 41539240 ~ 41541654 (+)

Expression


Co-expression Network