Gene
RNA
| Item | Value |
|---|---|
| gene id | G139040 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 37776591 ~ 37776949 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU159910 | True | 359 | lncRNA | 0.38 | 1 | 37776591 | 37776949 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501519 | LOC106605129 | coding | upstream | 12876 | 37699215 ~ 37763715 (+) |
| LOC110489000 | LOC106605130 | coding | upstream | 112298 | 37628152 ~ 37664293 (+) |
| LOC110488991 | LOC106605131 | coding | upstream | 154716 | 37607093 ~ 37621875 (+) |
| gnl2 | nog2 | coding | upstream | 173297 | 37572404 ~ 37603294 (+) |
| LOC110488976 | LOC106605133 | coding | upstream | 379929 | 37347656 ~ 37396662 (+) |
| LOC110489035 | LOC106605126 | coding | downstream | 86252 | 37863201 ~ 37890510 (+) |
| sh3d21 | LOC106605124 | coding | downstream | 115002 | 37891951 ~ 37911330 (+) |
| LOC110489135 | LOC106605117 | coding | downstream | 941343 | 38718292 ~ 38734398 (+) |
| LOC110489149 | LOC106605176 | coding | downstream | 980284 | 38757233 ~ 38786447 (+) |
| LOC110489163 | LOC106605115 | coding | downstream | 1012587 | 38789536 ~ 38823441 (+) |
| G139038 | LOC106586992 | non-coding | upstream | 3087 | 37772990 ~ 37773504 (+) |
| G138991 | NA | non-coding | upstream | 83410 | 37692982 ~ 37693181 (+) |
| G138805 | NA | non-coding | upstream | 186034 | 37535056 ~ 37590557 (+) |
| G138640 | NA | non-coding | upstream | 244478 | 37531419 ~ 37532113 (+) |
| G138631 | NA | non-coding | upstream | 257737 | 37518494 ~ 37518854 (+) |
| G139102 | NA | non-coding | downstream | 167953 | 37944902 ~ 37945164 (+) |
| G139103 | NA | non-coding | downstream | 168395 | 37945344 ~ 37945605 (+) |
| G139139 | LOC106605122 | non-coding | downstream | 226117 | 38003066 ~ 38007585 (+) |
| G139167 | NA | non-coding | downstream | 259526 | 38036475 ~ 38036812 (+) |
| G139177 | NA | non-coding | downstream | 271989 | 38048938 ~ 38049391 (+) |
| LOC110488849 | LOC106605147 | other | upstream | 1374620 | 36354883 ~ 36405310 (+) |
| G137058 | LOC106605156 | other | upstream | 1676314 | 36099611 ~ 36100277 (+) |
| G136994 | NA | other | upstream | 1738850 | 35982832 ~ 36037741 (+) |
| LOC100653444 | LOC106584591 | other | upstream | 1920191 | 35855149 ~ 35865269 (+) |
| LOC110488639 | LOC106605005 | other | upstream | 1989121 | 35785691 ~ 35788114 (+) |
| G139004 | NA | other | downstream | 112 | 37777061 ~ 37824010 (+) |
| G139089 | LOC106605123 | other | downstream | 142786 | 37919735 ~ 37940714 (+) |
| G139101 | NA | other | downstream | 166793 | 37943742 ~ 37944012 (+) |
| G139179 | NA | other | downstream | 274410 | 38051359 ~ 38051744 (+) |
| LOC110489834 | eny2 | other | downstream | 3762346 | 41539240 ~ 41541654 (+) |
