G139102


Basic Information

Item Value
gene id G139102
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37944902 ~ 37945164 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU159990
gtggggatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttacattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtgacaaactttaaacaacacttttcatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacaga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159990 True 263 lncRNA 0.42 1 37944902 37945164

Neighbor

gene id symbol gene type direction distance location
sh3d21 LOC106605124 coding upstream 33572 37891951 ~ 37911330 (+)
LOC110489035 LOC106605126 coding upstream 54392 37863201 ~ 37890510 (+)
LOC110501519 LOC106605129 coding upstream 181187 37699215 ~ 37763715 (+)
LOC110489000 LOC106605130 coding upstream 280609 37628152 ~ 37664293 (+)
LOC110488991 LOC106605131 coding upstream 323027 37607093 ~ 37621875 (+)
LOC110489135 LOC106605117 coding downstream 773128 38718292 ~ 38734398 (+)
LOC110489149 LOC106605176 coding downstream 812069 38757233 ~ 38786447 (+)
LOC110489163 LOC106605115 coding downstream 844372 38789536 ~ 38823441 (+)
LOC110489178 LOC106605114 coding downstream 878421 38823585 ~ 38847695 (+)
LOC110533769 LOC106583263 coding downstream 910018 38855182 ~ 38857226 (+)
G139040 NA non-coding upstream 167953 37776591 ~ 37776949 (+)
G139038 LOC106586992 non-coding upstream 171398 37772990 ~ 37773504 (+)
G138991 NA non-coding upstream 251721 37692982 ~ 37693181 (+)
G138805 NA non-coding upstream 354345 37535056 ~ 37590557 (+)
G138640 NA non-coding upstream 412789 37531419 ~ 37532113 (+)
G139103 NA non-coding downstream 180 37945344 ~ 37945605 (+)
G139139 LOC106605122 non-coding downstream 57902 38003066 ~ 38007585 (+)
G139167 NA non-coding downstream 91311 38036475 ~ 38036812 (+)
G139177 NA non-coding downstream 103774 38048938 ~ 38049391 (+)
G139180 NA non-coding downstream 107185 38052349 ~ 38052700 (+)
G139101 NA other upstream 890 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 4188 37919735 ~ 37940714 (+)
G139004 NA other upstream 120892 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 1542931 36354883 ~ 36405310 (+)
G137058 LOC106605156 other upstream 1844625 36099611 ~ 36100277 (+)
G139179 NA other downstream 106195 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 3594131 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 4023210 41968374 ~ 41969317 (+)
G144661 NA other downstream 4565166 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 5785708 43730872 ~ 43731218 (+)

Expression


Co-expression Network