G139103


Basic Information

Item Value
gene id G139103
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37945344 ~ 37945605 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU159991
tccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacaaacAGGTGGATTgtgtttatcatcattagtcatttaggtcaacattagatcattcagagatcctcactgaacttctggagag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159991 True 262 lncRNA 0.42 1 37945344 37945605

Neighbor

gene id symbol gene type direction distance location
sh3d21 LOC106605124 coding upstream 34014 37891951 ~ 37911330 (+)
LOC110489035 LOC106605126 coding upstream 54834 37863201 ~ 37890510 (+)
LOC110501519 LOC106605129 coding upstream 181629 37699215 ~ 37763715 (+)
LOC110489000 LOC106605130 coding upstream 281051 37628152 ~ 37664293 (+)
LOC110488991 LOC106605131 coding upstream 323469 37607093 ~ 37621875 (+)
LOC110489135 LOC106605117 coding downstream 772687 38718292 ~ 38734398 (+)
LOC110489149 LOC106605176 coding downstream 811628 38757233 ~ 38786447 (+)
LOC110489163 LOC106605115 coding downstream 843931 38789536 ~ 38823441 (+)
LOC110489178 LOC106605114 coding downstream 877980 38823585 ~ 38847695 (+)
LOC110533769 LOC106583263 coding downstream 909577 38855182 ~ 38857226 (+)
G139102 NA non-coding upstream 180 37944902 ~ 37945164 (+)
G139040 NA non-coding upstream 168395 37776591 ~ 37776949 (+)
G139038 LOC106586992 non-coding upstream 171840 37772990 ~ 37773504 (+)
G138991 NA non-coding upstream 252163 37692982 ~ 37693181 (+)
G138805 NA non-coding upstream 354787 37535056 ~ 37590557 (+)
G139139 LOC106605122 non-coding downstream 57461 38003066 ~ 38007585 (+)
G139167 NA non-coding downstream 90870 38036475 ~ 38036812 (+)
G139177 NA non-coding downstream 103333 38048938 ~ 38049391 (+)
G139180 NA non-coding downstream 106744 38052349 ~ 38052700 (+)
G139181 NA non-coding downstream 107537 38053142 ~ 38053430 (+)
G139101 NA other upstream 1332 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 4630 37919735 ~ 37940714 (+)
G139004 NA other upstream 121334 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 1543373 36354883 ~ 36405310 (+)
G137058 LOC106605156 other upstream 1845067 36099611 ~ 36100277 (+)
G139179 NA other downstream 105754 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 3593690 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 4022769 41968374 ~ 41969317 (+)
G144661 NA other downstream 4564725 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 5785267 43730872 ~ 43731218 (+)

Expression


Co-expression Network