G139177


Basic Information

Item Value
gene id G139177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 38048938 ~ 38049391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU160070
ATTGCCCACACCAAAACCACATATCTGCGTCACTGCATTTATTGGGCCAAATGTGGTTTGATGATGCATCAACATGCATTGGGGACAGGAAGAATGAAGACTTAGTGTACTACAAACAATACGTTATTAATGTTTCTTATTACAGTATAGCAATACATgggaaaatgtattttacatgGCCTGGTGGCATTGGTGGGTGGAGATTTCTCCTTAGGACAAATGGAATAGTCAAAAAGGAGCAAACGCCACCCACCTGAGGCACTGTGCCATGCAAAACTAATTTGCCCATTGAGTGCAAGACTGAATGCATCGAGTAAGACAGACATTGGATACTGTAGTAGTTTATTGGGTTCCTGTAGCTGCTGTTTTGGCTGGTTCTGCCAGTTTGGGGGGAGGGGTCTGCTTAATTTTCTTCCTTTGCTCCAGTTTCTGTTTCTGCACCTCTTTGAATACC

Function

NR:

description
28S ribosomal protein S15, mitochondrial-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160070 True 454 lncRNA 0.43 1 38048938 38049391

Neighbor

gene id symbol gene type direction distance location
sh3d21 LOC106605124 coding upstream 137608 37891951 ~ 37911330 (+)
LOC110489035 LOC106605126 coding upstream 158428 37863201 ~ 37890510 (+)
LOC110501519 LOC106605129 coding upstream 285223 37699215 ~ 37763715 (+)
LOC110489000 LOC106605130 coding upstream 384645 37628152 ~ 37664293 (+)
LOC110488991 LOC106605131 coding upstream 427063 37607093 ~ 37621875 (+)
LOC110489135 LOC106605117 coding downstream 668901 38718292 ~ 38734398 (+)
LOC110489149 LOC106605176 coding downstream 707842 38757233 ~ 38786447 (+)
LOC110489163 LOC106605115 coding downstream 740145 38789536 ~ 38823441 (+)
LOC110489178 LOC106605114 coding downstream 774194 38823585 ~ 38847695 (+)
LOC110533769 LOC106583263 coding downstream 805791 38855182 ~ 38857226 (+)
G139167 NA non-coding upstream 12126 38036475 ~ 38036812 (+)
G139139 LOC106605122 non-coding upstream 41353 38003066 ~ 38007585 (+)
G139103 NA non-coding upstream 103333 37945344 ~ 37945605 (+)
G139102 NA non-coding upstream 103774 37944902 ~ 37945164 (+)
G139040 NA non-coding upstream 271989 37776591 ~ 37776949 (+)
G139180 NA non-coding downstream 2958 38052349 ~ 38052700 (+)
G139181 NA non-coding downstream 3751 38053142 ~ 38053430 (+)
G139191 NA non-coding downstream 14378 38063769 ~ 38064016 (+)
G139452 NA non-coding downstream 63597 38112988 ~ 38113228 (+)
G139598 NA non-coding downstream 163849 38213240 ~ 38213536 (+)
G139101 NA other upstream 104926 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 108224 37919735 ~ 37940714 (+)
G139004 NA other upstream 224928 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 1646967 36354883 ~ 36405310 (+)
G137058 LOC106605156 other upstream 1948661 36099611 ~ 36100277 (+)
G139179 NA other downstream 1968 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 3489904 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 3918983 41968374 ~ 41969317 (+)
G144661 NA other downstream 4460939 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 5681481 43730872 ~ 43731218 (+)

Expression


Co-expression Network