G139180


Basic Information

Item Value
gene id G139180
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 38052349 ~ 38052700 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU160073
gtgtgtgaaaaccttgtgaagacttacagaaaacgtttgacctctgtcattgccaacaaagggtatataacaaagtatcgagataaacttttgttattgaccaaatacttattttccaccatcatttgcaaatacattcattaaaaatcctacaatgtgattttctggattttttttctcattttgtctgtcattgttgaagtgtacctatgatgaaaatgacaggcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtactgtaTAGTAGAGGTATAGTACAACCGCTGAGTGTGCCTATATATTGTACAAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160073 True 352 lncRNA 0.35 1 38052349 38052700

Neighbor

gene id symbol gene type direction distance location
sh3d21 LOC106605124 coding upstream 141019 37891951 ~ 37911330 (+)
LOC110489035 LOC106605126 coding upstream 161839 37863201 ~ 37890510 (+)
LOC110501519 LOC106605129 coding upstream 288634 37699215 ~ 37763715 (+)
LOC110489000 LOC106605130 coding upstream 388056 37628152 ~ 37664293 (+)
LOC110488991 LOC106605131 coding upstream 430474 37607093 ~ 37621875 (+)
LOC110489135 LOC106605117 coding downstream 665592 38718292 ~ 38734398 (+)
LOC110489149 LOC106605176 coding downstream 704533 38757233 ~ 38786447 (+)
LOC110489163 LOC106605115 coding downstream 736836 38789536 ~ 38823441 (+)
LOC110489178 LOC106605114 coding downstream 770885 38823585 ~ 38847695 (+)
LOC110533769 LOC106583263 coding downstream 802482 38855182 ~ 38857226 (+)
G139177 NA non-coding upstream 2958 38048938 ~ 38049391 (+)
G139167 NA non-coding upstream 15537 38036475 ~ 38036812 (+)
G139139 LOC106605122 non-coding upstream 44764 38003066 ~ 38007585 (+)
G139103 NA non-coding upstream 106744 37945344 ~ 37945605 (+)
G139102 NA non-coding upstream 107185 37944902 ~ 37945164 (+)
G139181 NA non-coding downstream 442 38053142 ~ 38053430 (+)
G139191 NA non-coding downstream 11069 38063769 ~ 38064016 (+)
G139452 NA non-coding downstream 60288 38112988 ~ 38113228 (+)
G139598 NA non-coding downstream 160540 38213240 ~ 38213536 (+)
G139679 NA non-coding downstream 215294 38267994 ~ 38268410 (+)
G139179 NA other upstream 605 38051359 ~ 38051744 (+)
G139101 NA other upstream 108337 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 111635 37919735 ~ 37940714 (+)
G139004 NA other upstream 228339 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 1650378 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 3486595 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 3915674 41968374 ~ 41969317 (+)
G144661 NA other downstream 4457630 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 5678172 43730872 ~ 43731218 (+)
G146091 NA other downstream 5716007 43768707 ~ 43769162 (+)

Expression


Co-expression Network