Gene
RNA
| Item | Value |
|---|---|
| gene id | G139386 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 38054907 ~ 38055140 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU160311 | True | 234 | lncRNA | 0.47 | 1 | 38054907 | 38055140 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489095 | LOC106605120 | coding | downstream | 1543 | 38048897 ~ 38053364 (-) |
| LOC110489105 | LOC106605178 | coding | downstream | 6501 | 38046700 ~ 38048666 (-) |
| LOC110501529 | NA | coding | downstream | 8468 | 38035966 ~ 38046439 (-) |
| LOC110489088 | LOC106583156 | coding | downstream | 25501 | 38003059 ~ 38029406 (-) |
| LOC110489074 | LOC106605123 | coding | downstream | 54583 | 37920689 ~ 38000324 (-) |
| LOC110489123 | LOC106605177 | coding | upstream | 31025 | 38086165 ~ 38087398 (-) |
| LOC110489131 | LOC106605119 | coding | upstream | 324052 | 38379192 ~ 38494341 (-) |
| LOC110489143 | LOC106605116 | coding | upstream | 685587 | 38738678 ~ 38779271 (-) |
| LOC110489186 | NA | coding | upstream | 797093 | 38852233 ~ 38854258 (-) |
| LOC110489192 | LOC106605112 | coding | upstream | 803366 | 38858506 ~ 38892046 (-) |
| G139385 | NA | non-coding | downstream | 877 | 38053774 ~ 38054030 (-) |
| G139333 | NA | non-coding | downstream | 106790 | 37947759 ~ 37948117 (-) |
| G139309 | LOC106605124 | non-coding | downstream | 143082 | 37906950 ~ 37911825 (-) |
| G139318 | csf3r | non-coding | upstream | 9898 | 38065038 ~ 38066918 (-) |
| G139393 | NA | non-coding | upstream | 12597 | 38067737 ~ 38067937 (-) |
| G139437 | NA | non-coding | upstream | 41744 | 38096884 ~ 38100499 (-) |
| G139527 | NA | non-coding | upstream | 98808 | 38153948 ~ 38171922 (-) |
| G139547 | NA | non-coding | upstream | 122476 | 38177616 ~ 38177842 (-) |
| G139231 | NA | other | downstream | 301949 | 37747441 ~ 37752958 (-) |
| LOC110501508 | LOC106605132 | other | downstream | 591149 | 37442359 ~ 37463839 (-) |
| pnrc2 | LOC106605140 | other | downstream | 1205562 | 36844929 ~ 36849373 (-) |
| G138080 | NA | other | downstream | 1226510 | 36825792 ~ 36828397 (-) |
| G140479 | NA | other | upstream | 772769 | 38827909 ~ 38828195 (-) |
| G140879 | NA | other | upstream | 1008722 | 39063862 ~ 39064418 (-) |
| G141363 | LOC106605077 | other | upstream | 1708793 | 39763933 ~ 39765473 (-) |
| LOC110489653 | LOC106605072 | other | upstream | 2169482 | 40224622 ~ 40298333 (-) |
| G142918 | NA | other | upstream | 2808074 | 40863214 ~ 40863721 (-) |
