G139452


Basic Information

Item Value
gene id G139452
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 38112988 ~ 38113228 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU160381
ctcctggttttgacccttgcctgtcctgacactgaatctgcctgcctgaccactctgcctgttctgacctcgagcCTTCCTATCACCTTGCACTGTTTGGACTTGGACCTGTTCACTGAACCCCTGCCtgtctgacctggtttatgaactctcgcctgtccccgacctgccttttgcctaccccttttggtataataaatatcggagctcaaccatctgcctcctgtgtctgcatttgggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160381 True 241 lncRNA 0.53 1 38112988 38113228

Neighbor

gene id symbol gene type direction distance location
sh3d21 LOC106605124 coding upstream 201658 37891951 ~ 37911330 (+)
LOC110489035 LOC106605126 coding upstream 222478 37863201 ~ 37890510 (+)
LOC110501519 LOC106605129 coding upstream 349273 37699215 ~ 37763715 (+)
LOC110489000 LOC106605130 coding upstream 448695 37628152 ~ 37664293 (+)
LOC110488991 LOC106605131 coding upstream 491113 37607093 ~ 37621875 (+)
LOC110489135 LOC106605117 coding downstream 605064 38718292 ~ 38734398 (+)
LOC110489149 LOC106605176 coding downstream 644005 38757233 ~ 38786447 (+)
LOC110489163 LOC106605115 coding downstream 676308 38789536 ~ 38823441 (+)
LOC110489178 LOC106605114 coding downstream 710357 38823585 ~ 38847695 (+)
LOC110533769 LOC106583263 coding downstream 741954 38855182 ~ 38857226 (+)
G139191 NA non-coding upstream 48972 38063769 ~ 38064016 (+)
G139181 NA non-coding upstream 59558 38053142 ~ 38053430 (+)
G139180 NA non-coding upstream 60288 38052349 ~ 38052700 (+)
G139177 NA non-coding upstream 63597 38048938 ~ 38049391 (+)
G139167 NA non-coding upstream 76176 38036475 ~ 38036812 (+)
G139598 NA non-coding downstream 100012 38213240 ~ 38213536 (+)
G139679 NA non-coding downstream 154766 38267994 ~ 38268410 (+)
G139681 NA non-coding downstream 155517 38268745 ~ 38269044 (+)
G139685 NA non-coding downstream 158295 38271523 ~ 38271735 (+)
G139738 NA non-coding downstream 200246 38313474 ~ 38313749 (+)
G139179 NA other upstream 61244 38051359 ~ 38051744 (+)
G139101 NA other upstream 168976 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 172274 37919735 ~ 37940714 (+)
G139004 NA other upstream 288978 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 1711017 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 3426067 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 3855146 41968374 ~ 41969317 (+)
G144661 NA other downstream 4397102 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 5617644 43730872 ~ 43731218 (+)
G146091 NA other downstream 5655479 43768707 ~ 43769162 (+)

Expression


Co-expression Network