Gene
RNA
| Item | Value |
|---|---|
| gene id | G139547 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 38177616 ~ 38177842 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU160482 | True | 227 | lncRNA | 0.51 | 1 | 38177616 | 38177842 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489123 | LOC106605177 | coding | downstream | 90218 | 38086165 ~ 38087398 (-) |
| LOC110489095 | LOC106605120 | coding | downstream | 124252 | 38048897 ~ 38053364 (-) |
| LOC110489105 | LOC106605178 | coding | downstream | 129210 | 38046700 ~ 38048666 (-) |
| LOC110501529 | NA | coding | downstream | 131177 | 38035966 ~ 38046439 (-) |
| LOC110489088 | LOC106583156 | coding | downstream | 148210 | 38003059 ~ 38029406 (-) |
| LOC110489131 | LOC106605119 | coding | upstream | 201350 | 38379192 ~ 38494341 (-) |
| LOC110489143 | LOC106605116 | coding | upstream | 562885 | 38738678 ~ 38779271 (-) |
| LOC110489186 | NA | coding | upstream | 674391 | 38852233 ~ 38854258 (-) |
| LOC110489192 | LOC106605112 | coding | upstream | 680664 | 38858506 ~ 38892046 (-) |
| LOC110489249 | LOC106605107 | coding | upstream | 774982 | 38952824 ~ 38963780 (-) |
| G139527 | NA | non-coding | downstream | 5694 | 38153948 ~ 38171922 (-) |
| G139437 | NA | non-coding | downstream | 77117 | 38096884 ~ 38100499 (-) |
| G139393 | NA | non-coding | downstream | 109679 | 38067737 ~ 38067937 (-) |
| G139318 | csf3r | non-coding | downstream | 110698 | 38065038 ~ 38066918 (-) |
| G139386 | NA | non-coding | downstream | 122476 | 38054907 ~ 38055140 (-) |
| G139550 | NA | non-coding | upstream | 1867 | 38179709 ~ 38179917 (-) |
| G139656 | NA | non-coding | upstream | 73417 | 38251259 ~ 38251717 (-) |
| G139686 | NA | non-coding | upstream | 93601 | 38271443 ~ 38271826 (-) |
| G139698 | NA | non-coding | upstream | 104504 | 38282346 ~ 38282554 (-) |
| G139767 | NA | non-coding | upstream | 161028 | 38338870 ~ 38339778 (-) |
| G139231 | NA | other | downstream | 424658 | 37747441 ~ 37752958 (-) |
| LOC110501508 | LOC106605132 | other | downstream | 713858 | 37442359 ~ 37463839 (-) |
| pnrc2 | LOC106605140 | other | downstream | 1328271 | 36844929 ~ 36849373 (-) |
| G138080 | NA | other | downstream | 1349219 | 36825792 ~ 36828397 (-) |
| G140479 | NA | other | upstream | 650067 | 38827909 ~ 38828195 (-) |
| G140879 | NA | other | upstream | 886020 | 39063862 ~ 39064418 (-) |
| G141363 | LOC106605077 | other | upstream | 1586091 | 39763933 ~ 39765473 (-) |
| LOC110489653 | LOC106605072 | other | upstream | 2046780 | 40224622 ~ 40298333 (-) |
| G142918 | NA | other | upstream | 2685372 | 40863214 ~ 40863721 (-) |
